Mauremys reevesii (Reeves's turtle): 120403552
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Entry
120403552 CDS
T07797
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mrv03036
]
120403552 (DICER1)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120403552 (DICER1)
microRNA pathway
RISC loading complex
120403552 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
SLFN-g3_helicase
Cas3-like_C_2
Amidoligase_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
120403552
NCBI-ProteinID:
XP_039390679
LinkDB
All DBs
Position
LG4:27746729..27847523
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLAKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSVLEIIESWTKEKWNQEFAKHEVLVMTCHVILNVLKNEYLSLSNINLLVFDECHLA
IQDHPYQEIMKICEKCPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYERLLKELDEALNFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETE
TEPIVDDDDIFPPYVLRPDDSSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
DTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDHPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL
QMLELITRLHQYIFSHILRLEKPALEFRPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTKYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSSLAENENYCKHSTIVVPENAAHQGATR
ASSAENHDQMSVNYITLLNESPSKLQIDVSVELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSYPVQNLYNSENQPKPSNECTLLSNKYRDGNVNKSTSDGSPKMA
VTTNISEALNFSKDRMDSEKNCSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDEMTKESLLANGKLDDDYDDEEDEDLMWRLPKEEADLEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSSYEWKAPKKSSLGNIQFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKKTEWNSTSCSSRENFNSQQKNLSPNC
ASASVANSECSLCKEMEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYSFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcaggactgcagcttatgacccctgct
tcctcaccaatgggtcccttttttggactgccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcgctaaagag
ctgtcctatcagatcaggggagacttcaacaaaaatggaaagagaacagttttcttggtc
aactcagcaaatcaagttgctcagcaagtgtcagctgtcaggacccattcagatctgaag
gtgggggagtattcagttttagaaataattgaatcatggacaaaggagaagtggaatcaa
gaatttgctaaacatgaggttctggttatgacatgtcatgtcattttgaatgttttaaaa
aatgaatacttatccctgtcaaacattaatcttctggtgtttgatgagtgccatcttgca
atccaggaccatccgtatcaagaaattatgaagatctgtgagaaatgtccatcctgtcct
cgaatcctgggattaacagcttccattttaaatgggaaatgtgatcctgctgagttagag
gagaagattcagaaactggagaaaatcctaaagagcaatgctgaaactgcaactgatttg
gtggtcttagatagatatacttctcagccatgtgagattgtggtagactgtggaccatat
accgacaaaagtgggctgtatgaaagattgttaaaagaattggatgaagcacttaacttt
ctaaatgactgcaacatatctgtacattcaaaagagagagactctacattaatttctaaa
cagatactgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataag
gtagctggaatgatggtgagagagctacagaagtacatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacactttcctaagaaaaatacatgcactgtgtgaa
gagcacttctcacctgcctcacttgatctgaaatttgtaaccccgaaagtaataaaactg
cttgaaatcttgcgcaaatataaaccatatgagcggcagcagtttgaaagtgttgagtgg
tataataataggaatcaggataattatgtgtcttggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagacaaatttcccttctccctttactaat
attttatgtggaattatttttgtggaaaggagatacacagcagtcgtcctaaacaggttg
ataaaggaagctggaaaacaggatccagagctggcttacatcagtagcaattttataact
ggacatggcattggaaagaatcagcctcgtaacaaacagatggaagtggaattcagaaaa
caagaagaggtacttagaaaatttcgagcacatgagaccaacttgcttattgctactagt
attgttgaagagggtgttgacataccaaaatgcaatttggtagtgcgttttgatttgccc
acagaatatcgttcctatgtgcaatccaaaggaagagccagggcaccaatctcaaattac
atcatgttagcagacacagacaaaatcaaaagttttgaagaagatcttaaaacctacaaa
gcaattgaaaagatcctcagaaacaaatgctcgaagtccgttgatactagtgaaaccgaa
actgaacccatcgtggatgatgatgatatctttccaccctatgtgttgaggccagacgat
agcagtccaagagttacaattaacactgcgattggacacatcaataggtactgcgcaaga
ttaccaagcgatccatttactcatctggctcctaagtgtaaaacccgcgaactacctgat
gatacattttattcaactctctacctgccaatcaactcacctcttcgagcctctattgtt
ggtcctccaatgagttgtgcaagactggctgagagagtggtagctcttatttgctgtgaa
aaacttcacaaaattggtgaactggatgatcacttgatgccggttggaaaagaaacggtt
aagtatgaggaggaacttgatttacatgatgaagaggaaaccagtgttccaggaagacca
gggtctacaaaacgaaggcagtgctaccctaaagctattccagaatgtttgagagatagt
taccccagacctgatcatccctgttatctgtatgtaataggaatggtgttaactacccct
ttgcctgacgagctcaactttaggaggcgaaagctgtatcctcctgaggatacaacacga
tgctttggaatactgacagccaaacctatacctcagattcctcactttcctgtgtacaca
cgttctggagaggttactatatctattgagctaaagaagtctggttttatgttgtcttta
caaatgcttgagctgatcacaagacttcaccagtacattttctcacatattcttcggctt
gagaaacctgcactagagttcagacctacagaagctgattcagcctattgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagttcatggaagatatt
gaaaaatctgaagcacgtacaggcattcccagtacaaagtacacaaaagaaactccattt
attttcaaattagaagattaccaggatgcagttatcattccacggtatcgaaattttgat
cagcctcatcgattctatgtagctgatgtatacactgatcttactccactcagtaaattt
ccttcccctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctg
accaatctcaaccagccactgctggatgtggaccacacgtcttcaagacttaatcttttg
actcctcgccatttgaaccagaaggggaaagctcttccactaagcagtgctgagaagagg
aaagctaagtgggaaagtctgcagaataagcagatattggttccagaactctgtgctata
catcctattccagcatcactgtggagaaaagcagtttgtctccccagcatactttatcgt
ctgcactgcctgttgacagcagaggaactgagagcccaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagacttcagatatcctaatctggactttgggtggaaaaag
tccattgacagcaagtccttcatctctattcctagctcttctttagcagagaatgagaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctactaga
gcctcctctgcagaaaatcatgaccaaatgtctgtgaactacataacactgctcaatgag
tcacccagtaaactccaaattgatgtatcggtagaacttgcagcaattaatggtgtttct
tataataaaaatcttgccaatggcaattgtgatttagttaatagagacttttgccaagga
aatcaactgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccgtt
cagaatttatacaacagtgagaaccagcccaaacccagcaatgaatgtactctactgagt
aataaataccgtgatggaaatgttaacaaatctacctcagatggaagccccaaaatggca
gtgaccaccaatatttcagaagctcttaatttttcaaaagacagaatggattctgaaaag
aactgttccagtggatactcctcaaaaactcttggcccaaaccctggtctcattcttcag
gctttgactctttcaaatgctagtgatggatttaatctagagcggctcgaaatgcttggt
gattcatttttaaagcatgccatcactacctatttgttttgcacttacccagatgctcat
gagggacgcctatcatatatgagaagtaaaaaagtcagcaattgtaacttgtatcgtctt
gggaagaagaaagggctgcctagtcgtatggtggtatctatttttgatccacccgtcaac
tggctcccccctggttacatagtaaaccaagacaagagtaacacagacaaatgggagaaa
gatgaaatgacaaaagaaagcttgttagctaatggtaaacttgatgacgattatgatgat
gaagaggatgaagacctaatgtggaggttacccaaggaagaagctgaccttgaagatgat
tttttggaatatgatcaggaacatatcaaattcattgataatatgttaatgggatctggg
gcttttgtgaagaaaatttctctctcgcccttttcaaccactgattctagctatgaatgg
aaagcacccaaaaaatcatccctgggtaatattcagttttcttcagattttgatgatttt
gactatagttcttgggatgctatgtgttatctggatcctagcaaggctgtcgaagaagat
gattttgtagtaggcttctggaatccgtcagaagaaaactgtggtgttgacacaggaaaa
cagtctatctcgtatgacttgcatacagagcagtgtattgctgacaaaagcattgcagat
tgtgtggaagccttgctgggctgctatctgactagctgtggtgaaagagctgctcagctt
ttcctgtgttcattagggttgaaggtgctcccagtaatgaaaaaaactgagtggaacagc
acttcgtgttctagcagggagaattttaacagtcaacagaaaaatctttcaccaaactgt
gcttctgcctctgtagccaattcagagtgttctctgtgtaaagaaatggagtatggctgt
ttgaagattccaccaaggtgtatgtttgatcacccagatgctgataaaacactgaatcac
ctgatatctggttttgaaaattttgagaagaaaattaactacagttttaagaataaggct
tatcttcttcaggcatttactcatgcctcctaccattacaataccattactgattgttac
cagcgcttggaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcaacactctccaggagttctaactgacctacgatccgctttagtcaat
aataccatctttgcatcattagctgtaaagtatgactatcacaagtacttcaaagctgtc
tctcctgagctgtttcatgttattgatgactttgtacagtttcagatggaaaagaatgaa
atgcaaggaatggattctgagctcagaagatctgaagaggatgaagagaaggaagaagat
attgaagtaccaaaggccatgggggatatatttgagtcactagctggtgccatttatatg
gatagtgggatgtctttggaaatggtttggcatgtgtactatcctatgatgaggccatta
atagaaaagttttctgcaaatgtgcctcgttccccagtgcgggagctgctggagatggaa
ccagagacagccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaaca
gtggaagttgtagggaaaggaaagtttaaaggtgttggcagaagctataggattgccaaa
tctgcagctgcaagaagagcactacgaagcctcaaagcaaaccaacctcaggtcccaaac
agctga
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