Mauremys reevesii (Reeves's turtle): 120403844
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Entry
120403844 CDS
T07797
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrv03009
]
120403844 (IGHMBP2)
03012 Translation factors [BR:
mrv03012
]
120403844 (IGHMBP2)
Enzymes [BR:
mrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120403844 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
120403844 (IGHMBP2)
Ribosome biogenesis [BR:
mrv03009
]
Eukaryotic type
Other ribosome biogenesis factors
120403844 (IGHMBP2)
Translation factors [BR:
mrv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120403844 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Helicase_RecD
ResIII
nSTAND3
DEAD
AAA_16
AAA_22
UvrD-helicase
SLFN-g3_helicase
IstB_IS21
AAA_25
Flavi_DEAD
AAA_33
ABC_tran
AAA
Zot
PhoH
RL
AAA_18
DnaB_C
CbiA
ATPase
SRP54
AAA_31
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
120403844
NCBI-ProteinID:
XP_039391586
LinkDB
All DBs
Position
LG4:114967147..115058124
Genome browser
AA seq
989 aa
AA seq
DB search
MAVPEFVSRQLELLQEEREAEIEETRAWRESIFLKELQRRGVCLLKLQVASQRTGLYGRL
LITFQPRKYDPEAELPCNSFGPGDIVGVYESAGQGDPLSTGIVTRITPKSVTVAFEESRD
GLLSLGQENSYRLLKLANDVTYKRLKKALNTLNQYHSGPACNLIDVLFFSSDPSAPGETK
PLKFYNESLDVSQREAVSFSLAQKELAIIHGPPGTGKTTTVVELILQAVQQGLKVLCCAP
SNIAVDNLVERLAGYKEKILRLGHPARLLETIQHHSLDAVLARGDNAQIVADIRKDIDQA
FIKTKKTQDNGERSHFRNEIKALRKELKEREETAMTEILTRANVVLATNTGASSDGPLKL
LPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISDKAAAKGLSLTLM
ERLIQKYGERIVKMLTVQYRMHQAIMQWASTEMYCGRLSAHPSVAHHLLKDLPGVASTDE
TRIPLLLIDTAGCGLFELEVEDEQSKGNQGEVRLVGLHVLALVKAGVKARDIAVIAPYNL
QVDMLREHLCHRYPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVICDSRTVSSQAFLKRLVDYLSEHGEVRTAFEYLDDIMPENYSHENSQGHSEQG
AGPKTSTTSAPKPPPEGRKSKPNSTKPSTRKPAAGPLQSVNEARVERPEMNDNSGKFRAM
MVEFLESSEMQLDFPSSLNSHDRMLVHQMAEEHGLQHVSTGEGRERYISISKRTTTVSSS
PVNTGGSEQIPPAESQSPAKEALAPVKKGGSSMSSGKVDLKTLHLERMQREKAKQEERVR
KNQELSISLQEIAGKKHKNEAKGKTMVKTGADSHAEEDIDALISAAVQADNICGFPRCKA
SVTTLGQLCLHCKKRYCLSHHIPEIHGCGEKAKAQARQRISREGILYAGSGSKDKSLDPA
KRAHLQRRLDKKLNELTSQRKSKKKDKEK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccggagttcgtgtcccggcagctggagctgctgcaggaggagagagaggcc
gagatcgaggagaccagggcatggcgggaaagcatcttcctgaaagaactccagcgcaga
ggggtctgcttgctcaaactgcaagtagccagtcaaagaactggactgtacggacggcta
cttataacgtttcagcctagaaaatacgatccagaggcagagctgccctgtaacagcttt
gggcctggtgacattgtgggtgtttatgaatctgctggtcagggtgatccactttccaca
ggaattgtgacccgcataacccccaaatcagttaccgtcgcctttgaggagtctcgagat
ggcctgttgagcttgggccaagagaattcctaccgcctgctgaagctagccaatgatgtc
acctacaagaggctgaaaaaagctttaaacacactaaatcagtatcactctggtccagca
tgcaatcttatcgatgtcctcttcttttcctctgatccaagtgctcccggtgaaacaaag
cctttaaaattctataatgaatcactggatgtctcccagagggaggctgtttccttctcg
ctggcacagaaagaacttgccatcatccatggaccaccaggcactggcaaaaccactacc
gtggtcgagctaatacttcaagctgtgcagcaaggcctgaaagtcctgtgttgtgctccc
tcaaacattgcggtggataatctggtggaaagactggctggctacaaggagaagatactg
cgtcttggtcaccctgctcgtctgctggagaccatccagcatcattccctggatgcggtc
ttggcacggggcgataatgcccagatagtggcagatatcaggaaggatattgaccaggca
ttcataaaaaccaaaaagacccaggacaacggggagagaagccatttccgaaatgagatt
aaggcactgagaaaggagctgaaggagcgagaagaaactgctatgactgaaatccttacc
cgggctaatgttgttcttgcaacaaatacaggtgcttcctctgatggtccactgaagtta
cttcctgaaaatcactttgatctggtagtgatagatgaatgtgctcaggccctagaagca
agctgctggatccctctgctgaaagccagaaagtgtatcctggctggtgatcacaaacag
ctgcctcccacaatcatatctgacaaggctgcagcaaagggtctttctctcaccttaatg
gagcgtctgattcagaaatatggcgagagaatagtgaagatgctgactgtgcaataccga
atgcaccaggccataatgcagtgggcctccacagaaatgtactgtggccgactctccgct
cacccttccgtagcgcatcatttactgaaggacctgccgggagttgcttctacagacgag
actaggattccgttgctgcttatagacacagctggctgtggcttatttgagcttgaagtg
gaagatgaacagtctaaagggaatcaaggggaagtgcgtcttgtcggcctgcacgtcctg
gctttggtgaaagctggtgttaaagcaagagacatcgctgtcattgctccttacaacctc
caggtggacatgctaagagagcatctttgtcaccgatatccagagctggaaattaaatca
gtagatggcttccagggacgggagaaggaggctgtcgtgctctcctttgtgagatccaat
cggaagggtgaggtgggttttctcgctgaagaccggaggataaacgtggccgtgactcgg
gcacgacgccatgtggcagtcatctgtgactcgcggaccgtcagcagccaggcctttctg
aaacggctggtggattatctgagtgagcatggggaagtgcggacggccttcgagtacctc
gacgacatcatgccagaaaactactctcacgagaactctcaaggtcatagcgagcaaggg
gcagggcctaaaaccagcacaacctctgctccgaaacctccgcctgaaggccggaaatcc
aaaccaaattcaacgaaaccatccacacgcaagccagcagcaggtcccttgcagagtgtg
aacgaggccagggtggaaagaccagagatgaatgacaattcaggcaagttcagagccatg
atggtagagtttctggagagcagcgagatgcagttggatttcccttcctccttaaactct
cacgacaggatgctggtgcaccaaatggctgaagaacatggattgcagcatgtaagcacc
ggggaggggcgagagaggtacatcagcatcagcaagagaaccaccaccgtaagctcctct
ccagtgaatacgggtggcagtgagcaaatcccgcctgccgaatctcaaagccctgcaaaa
gaggcgctagcgcctgtcaagaagggaggaagcagcatgagctcagggaaagtggatctg
aaaacgctgcacctggagagaatgcaacgggaaaaagccaaacaggaagagagggtcaga
aagaatcaggagctgagcatcagtttgcaggaaatagctggaaagaaacacaaaaatgaa
gccaaaggaaagactatggttaaaaccggagcggacagccacgctgaagaagatatcgat
gccctgatttctgcagcagtgcaagctgacaatatatgtggtttccccaggtgtaaagcc
agcgttacgaccttgggacagctctgtctgcattgcaaaaagcgctactgccttagccat
cacatcccagagattcatgggtgtggggagaaggccaaagcacaagctcggcagagaatt
agcagagaaggaattctctacgctgggagtggatcaaaagacaagtcactggacccagca
aaaagagctcatctccagaggcgcctggataaaaaacttaatgaattgaccagccagaga
aagagcaaaaagaaagacaaagaaaaatga
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