Mauremys reevesii (Reeves's turtle): 120404977
Help
Entry
120404977 CDS
T07797
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrv03000
]
120404977 (SOX13)
Transcription factors [BR:
mrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120404977 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120404977
NCBI-ProteinID:
XP_039394034
LinkDB
All DBs
Position
LG4:131773803..131855588
Genome browser
AA seq
616 aa
AA seq
DB search
MMSMRNPVSPHLELDGAGNMVNCTIKTEEKTDSCHESPQGAPTGSDPHSSDLHGVPLSLR
ESADPRTLPQESRSPVSNALDSRRSAFEPAVSSQEKLDFNRNLKEVMPTIEKLLSSDWKE
RLLGRNTMESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQ
QQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDS
QLALPIQPIPCKPVEYPMQLLHSPPPPTLKRPAGSGHLQMQESSQPLNLTAKPKSSELSS
ASSSPSLKMSSCRSLTPNHGVTRDLQSSPPSLPLGFLGEGDAITKALQDARQLLHCHSGA
TESSLNNPYRKDQMGLDSSPTKERMEETCMHRLDESMLTCDMDGSRHFPESRNNNHIKRP
MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEK
YPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDTRQGYLIAPQSSQMQASSSDVLYQ
RPVGMQLAPPLVEHYLPRSMDPNMPVIVNTRSLKSQEGDGGEDGHSVADGEMYRYSEDED
SEGEDKSDGELVVLTD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgaggaaccctgtttctccccacctggaacttgatggagccgggaacatg
gtgaactgcaccatcaagacggaagagaagacagatagctgccatgagtccccccaggga
gcacccactggctccgatccccactccagcgatttgcatggagtgccactgtctttgaga
gagagtgctgacccccggactcttccacaggaatcccggtctcctgtgagcaatgcgtta
gattccaggaggtctgcgtttgagcctgctgtcagcagccaggaaaagttagatttcaac
agaaacttgaaagaggttatgccaaccattgagaagttactctccagtgactggaaagag
aggcttctgggtagaaacaccatggaatccaaagaggtgaaaggaacccaggagagctta
gcggagaaggagctgcagttgcttgtcatgatcaatcagctctccaccttgcgggaccag
cttctgacggcccattcggagcagaagaacatggcagccatgctgtttgagaagcagcag
cagcagatggagctggctcggcagcagcaggagcagattgccaagcagcagcagcagctc
attcagcagcagcacaagattaacctgctgcagcaacagatccagcaggtcaatatgccc
tatgtcatgattccagcctttcctcccagccaccagcctctccccgtgaccccagactcc
cagcttgcgcttcccatccagcccatcccttgcaaaccagtggagtaccccatgcagctg
ctgcacagccctccccctccgacgctgaagagacccgccggctcaggccacctccagatg
caggagtcttcacagccactgaacctaacagccaaacccaaaagctctgagctctccagt
gcctccagctcacccagcctgaagatgagcagctgccgatccctcactcctaaccacggg
gtcacgagagaccttcagtccagccctcccagtctgcctctgggatttctgggagagggg
gacgccatcactaaagcgctccaggatgcacggcagctcctgcactgccacagcggggcg
acggagagctctctcaataatccctaccggaaggaccaaatgggcttggattcctcgccc
acgaaggagcggatggaggagacgtgcatgcacagactggacgagtccatgttaacctgc
gatatggatggctcacgacacttccccgagtccaggaacaacaaccacataaagcggccc
atgaatgctttcatggtgtgggccaaggacgagaggcggaagattttgcaggccttcccg
gatatgcacaactccagtatcagcaagatcctggggtcccggtggaaatcgatgacgaac
caagagaagcagccctattatgaggagcaggcgcggctgagccggcagcacctggagaag
tatcccgactacaaatacaagccgcggccaaagcgcacctgcatcgtggaggggaagcgg
ctgcgcgtgggcgagtacaaggcgctgatgaggaacagacggcaagacaccaggcagggc
tacttgatagcgccccagagcagtcagatgcaagcctcttcatcggacgtcctgtaccag
aggccggtgggcatgcagctggctccaccgctggtggagcactacctgccccgcagcatg
gaccccaacatgcccgtcatcgtcaacacgcgcagcctcaagtcgcaagagggtgacggc
ggggaggacgggcactcggtggcggatggcgagatgtaccggtacagcgaggacgaggac
tccgagggcgaggacaagagcgacggggagctggtggtgctcacggactga
DBGET
integrated database retrieval system
