Mauremys reevesii (Reeves's turtle): 120406296
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Entry
120406296 CDS
T07797
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120406296 (HTT)
04131 Membrane trafficking [BR:
mrv04131
]
120406296 (HTT)
03029 Mitochondrial biogenesis [BR:
mrv03029
]
120406296 (HTT)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120406296 (HTT)
Membrane trafficking [BR:
mrv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120406296 (HTT)
Mitochondrial biogenesis [BR:
mrv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120406296 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
120406296
NCBI-ProteinID:
XP_039396839
LinkDB
All DBs
Position
LG5:complement(118733711..118927884)
Genome browser
AA seq
3118 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRAKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAAVWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYTWLLNV
LLGLLVPVEDEHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPDQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPDLLHALTTSGGITQVSVSKDESISR
SRSGSIVELIARGGSSCSPCLSRKLKGKVLLGEEEGLEDDPETRSEVSTATFAASMKSEI
TSELASSSGVSTAGSTVSSAADLTGHDIITEQPRSQHTLQSDSVDLTSCDLASTTTEGEE
DDMLSRSSSQISTVQSDSTMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLEGT
ESQYSGMQIGQLQDEEDEAANVLHDDSSEPFRNSSLALQQPHLLKNMSHSRQPSDSSVDR
FMAKEEAIESVDHENKPSRIKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLETMGEEYEEQYVSDVLNYIDHGDPQIR
GATAILCGTIVYSILNKSRFDVENWLANVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACAAVRHCIMSLCSSSYSELGLQLIIDLLTLKNSSYWLVRTELLETLAEIDFRLVSFLEG
KADNLHRGVHHYTGLLKLQDRVLNNVVIYLLGDEDPRVRHIAAASLMRLVPRLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNLVQSPTDVTMENNLSRV
ISAVSQALTTSTTRALTFGCCEALCLLSTTFPVCTWTVGWHCGYVSSSSIQASRIHVYKN
RGHSFSASQLSPSEESRKSCTIGMAGMVLSLLSTAWFPLDLSAHQDALILAGNLLAASAP
KSLKNPWTAEEDMNPGAAKQEEPWPALADRTLVTLVEQLFSHLLKTINICAHVVDDVAPG
PAIKATLPSLSNPPSLSPIRRKGKEREPVEQTSVPMSPKKGSETNPATRQTDTSGPAPTS
KSSSLGSFYHLPSYLKLYDVLKATHANYKVTLDLQNNIEKFGGFLRSALDVLSQILELAT
LQDIGKCVEEILGYLKSCFNREPMMATVCVQQLLKTLFGTNLASQYDGLSSNPSKSQGKA
QRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAESEHDASGWFDVLQKVSTQLK
TSLTSVTKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNY
CLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQ
LCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYH
QVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHEALGVLNTLFEILA
PSSLRPVDMLLRSMFVTPCTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFS
PYLLSCQTINRLRDGENNVPTPEEQIELKQAKYLPEETFSRFLLQLVGILLEDIATKQLK
VDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTGDGSDGSFYTLESLSGL
VQFMIPTHPSLVLLWCQILLLVNYTNYSWWSEVHQTPKRHSLSSTKLLSPQISGDSDEFD
SESKFGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFIS
AVHRNSAASGLFIQAIQSRCENLATPTTLKKTLQCLEGIHLSQSGAVLMLYVDKLLCTPF
RVLARMVDTLACRRVEMLLAATFQNSVSQLPVEELDRIQEYLQNSGLAPRHQRLYSLLDR
FRLTVAPETTSPSPLVTSHPLDGENQPALENVIPDKDWYVSLVRSQCWVRSDSALLEGAE
LVNRIPQPELNSFMTSKEFNLSLLAPCLSLGMNEISEDQKSSLFETAHRVTLDHVCNIVQ
KLPASHQVFQPLQPAETSAYWSKLSDIFGDTMLYQTVMKLSRALAQYLSLLSKLPASLCI
PPDKESDILKFVVMSLEALSWHLIHEQIPLSIDLQAALECCCLTLQQPGLWNLLASAVYV
TQACSLINCVRFIIEAVAIEPGNQLLSPERKKNTSKGVSEDEVDSNAQTKYITTACEMVA
EMVECLQTVLTCGHKRNNSIPAFLTPVLKNIIISLGRLPLVNSYTRVPPLVWKLGWSPKP
AGDFGTAFPEIPVEFLQEKEIFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPIVMDQ
EESQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNPAISCLEQQPRNKALKVLDTRFG
RKLSVIRGIVEQEIQAMISKRDNIATHHFYQAWDPVPSLSPATTGGLISHEKLLLQINTE
REMGNMGYKLGQVSIHSVWLGNNITPLREEEWDEDEEDESDMPAPSSPPTSPINSRKHRA
GVDIHSCSQFLLELYSQWILPSNPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTL
TELRKVHPSEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALH
GILYILECDLLDETAKQLIPIISEYLLSNLRGIAHCVNVHNQQHILVMCAAAFYLIENYP
LDVGPEFSAGIIQVCGVMVSGSDESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSV
DRVNIHSPHRAMAALGLMLTCMYTGKEKISPSRATDANPTAPDSESVIVAMERVSVLFDR
IRKGFPFEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLH
TTGQSPMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTTQWVSAILPHIISRMGKSE
QVDINLFCLVAIDFYRHQIDEELDRRAFQSVFEMVASPGSPYHRLLTCLQNVHKITAC
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atggccactatggagaaactgatgaaggccttcgagtccctccgctcctttcagcagcag
caggggccggctgccatccccgaggagccgctccagagagcaaagaaagaactttcaact
accaagaaagatcgagtgaaccactgcctgacaatatgtgaaaacatagttgctcagtct
ctaaggaattctccggaatttcagaaactgctgggtattgctatggaactctttcttctc
tgtagtgatgatgcagagtctgatgtcaggatggttgctgatgaatgtctcaataaagtt
ataaaagctttgatggattccaaccttcctaggttacagttagaactctataaagaaatt
aaaaagaatggtgcttctcgaagcctacgtgctgcagtttggaggtttgctgagcttgcc
catctggttcgacctcagaagtgcaggccatacttagtcaacctattgccctgtctaaca
cgaataagtaagcggcctgaagaatcggtacaagagacactggctgcagcaataccaaaa
atcatggcagcatttggcaactttgcaaatgacaatgaaatcaaggttttattgaaggct
ttcattgctaatcttaaatccagttctcctaccatccgtcgaacagcagctggatcagca
gttagcatctgtcaacactcacgaagaacacaatatttttatacctggttactgaatgtg
cttttaggtttgttggttcctgtggaagatgaacatcctactcttttaattcttggagta
ctgctcacactaaggtatctaataccattactgcagcagcaagtaaaggataccagtctg
aaaggcagttttggtgtaacacgaaaagaaacagagatatcaccttctccagatcagctt
atacaggtctatgaattgactttgcattacactcagcaccaggaccacaatgttgtgact
ggagctttagaactattacagcaactttttagaacaccaccgcctgatcttcttcatgcc
ctgaccacttcaggaggcattacacaggtcagtgtatccaaagacgagtctatcagcaga
agccgcagtggaagcatagtggagcttatagctagaggggggtcttcatgcagtccttgt
ctgtcaagaaaactaaaaggtaaagtacttttaggagaagaagaaggcttggaggatgac
cctgaaacacggtcagaagtcagcactgcaacttttgcagcctccatgaagagtgagata
accagtgaattagcttcttcatcaggagtatcaacagctggatcaacagtaagttctgca
gctgatctcacaggacatgacatcatcactgagcagccacgttcacaacatactttgcaa
tcagactctgtagacctgaccagttgtgatttggccagcacaactactgaaggggaagag
gatgacatgcttagtcggagctccagccaaatcagcactgtccagtcagacagcactatg
gacttgaatgatggcacgcaggcttcttcaccagttagtgatagctctcagactaccaca
gaaggtccagattcagctgtgaccccttcggacagttctgaaattgttctagagggtact
gaaagccaatattctggaatgcagattggacagctgcaagatgaggaagatgaagctgca
aatgttctccatgatgactcctcagagcctttcagaaattcttcccttgcccttcagcag
ccacacttattgaaaaacatgagccatagcaggcagccttctgacagcagtgtagataga
ttcatggcaaaagaagaagcaatagaatctgttgatcatgaaaataagccttccagaata
aagggagatataggtcactacacagatggaaattctgctcctctggttcactgtgttcgt
ctcctgtctgcttcttttctgcttactggggagaaaggtgctttagttcctgatagggat
gtgagggtcagtgtaaaagcattggcagtaagttgtgttggagctgctgttgcccttcat
cctgaatctttcttcagcaaactgtataagacacctcttgaaaccatgggagaagagtat
gaagagcagtatgtatcagatgttttgaactatattgatcatggagatccccagattaga
ggagctactgccattctctgtggaaccattgtctactccattctcaataaatcacgtttt
gatgtggaaaactggctagcaaatgtcagaagttcaacaggaaatctcttttctctggta
gactgtatacctctcttgcagaaaactctgaaagacgaatcctcagttacatgcaaactg
gcttgtgcagctgtgaggcattgcatcatgagcttgtgcagtagcagttatagtgaacta
ggtttacagttaatcatcgacctccttactctgaagaatagttcttattggctagtaagg
acagagcttctggagactcttgctgagatagatttccggttagtcagctttttggaagga
aaagcagacaacttgcacagaggtgttcatcattatactgggctattaaaacttcaggac
agagtgctcaacaatgttgtaatctaccttcttggtgatgaagaccccagagtgagacac
atagctgcagcttctttgatgaggcttgttccaaggctgttttataattgtgaccaagga
caggctgatccagtagtggccgtggcaagagaccaaagcagtgtctacttgaaactccta
atgcatgagactcagcctccatctcactttgcagtgagcactatcaccagaacatacagg
ggttacaacctggtgcaaagtccaacagatgtcactatggaaaacaacctttctagggtt
atctcagccgtttcccaggcattgacaacatcaactacaagagcgcttacatttggctgc
tgtgaagctttgtgtcttctctccacaacgtttccagtctgcacatggactgtaggatgg
cactgtgggtatgtttcttcatccagtatacaagcttctagaattcatgtttacaaaaac
agaggacactcattcagtgcttcccagctgagtccttcggaggaatctcggaagagctgt
acaattggaatggctggaatggttttgtcccttctttcaacggcctggttcccactggat
ctttctgcacatcaagatgctttgattttggctggaaacttgcttgcagcaagtgccccc
aaatctttgaaaaacccctggactgctgaagaagatatgaatccaggtgctgctaaacaa
gaggagccatggccagctttggctgaccgaactcttgttactttggtagaacaactcttt
tctcatttgctgaagaccattaatatttgtgctcatgtggtggatgatgttgctcctggc
ccagcaataaaggcaacattgccttctctctcaaacccaccttctctaagtccaattcgt
cggaaagggaaagagagagaacctgtggaacaaacatctgtaccaatgagccctaaaaag
ggtagtgaaactaatccagctactaggcaaaccgatacttcagggcctgctccaacaagc
aaatcgtcgtcactgggcagtttttatcatcttccatcgtatctcaagttatatgatgtc
ttgaaagctacccatgctaactataaggttacattggatcttcagaacaacatcgaaaaa
tttggaggtttcctacgatctgccctggatgtcctctctcaaattttggaactagcaact
cttcaagacattggaaagtgcgttgaagagattttggggtatttgaaatcctgtttcaac
agagaaccaatgatggcaacagtttgtgtacagcagttgctgaagactttatttggcacg
aacttggcatcgcaatatgatggcttatcttcaaaccccagcaaatctcaaggcaaagcc
cagcgtttaggctcttctaatttgaggcctggtctttatcattactgcttcatggcccct
tatacacactttacacaggcacttgctgatgcgagtctaaggaacatggtacaggcagag
tcggaacatgatgcttcaggatggtttgatgtgctgcagaaagtttctacgcaactgaaa
actagccttacaagtgtaacaaaacatcgtgctgacaagaatgctattcacaatcacatt
cgcttgtttgaaccccttgttataaaagctttaaagcaatatactacgacgacgtcggta
caactacagaggcaggttttagatctccttgcacagctggttcagctacgggttaactac
tgtcttctagattcggatcaggtgtttattggatttgtgctaaagcagtttgaatacatt
gaagtgggacagttcagggaatccgaggcaattatccctaatatatttttcttcttggta
ttattgtcttatgagcgatatcactccaaacagataattggaattcctaagattattcag
ctgtgtgatggtatcatggccagtggaaggaaagctgttacacatgctataccagctctg
caacccattgtccatgacctctttgtattacgaggaacaaataaagctgatgctggaaaa
gaactggaaacacaaaaagaggtggtggtgtcaatgctactaagacttatccagtatcat
caggtgctggagatgttcatcctagtactacaacagtgccacaaagagaatgaagacaaa
tggaaaagattgtcccgacagatagcagatataattctcccaatgttagcaaaacaacag
atgcatatagattcccatgaagctctgggagtattgaacactttatttgaaattttggct
ccttcatccctccgtccagtggacatgcttttaagaagtatgtttgttactccctgtaca
atggcatcagtgagcactgttcagttatggatatctggtatcctagctatccttagagtt
ctgatttcacaatcaacagaggatatagttctatctcgtattcaagagctttctttctcc
ccttacttattgtcatgtcaaacaattaacaggctaagggatggggagaataatgtaccc
acacctgaagaacaaattgagctgaaacaggctaaatatctgcctgaagagacattttct
aggttcttgttacagttagtgggcattctattggaagatattgctacaaaacagttgaaa
gtggacatgaatgaacagcagcacactttctattgccaagagttgggcacattgcttatg
tgtttaatacatatcttcaaatcagggatgttcagaagaatcacagctgctgccagcagg
ctttttacaggagatggatctgatggtagtttttatacccttgagagtctgagtggtctt
gttcagttcatgattcccacacacccttctttagtgctcctctggtgtcaaatcctactt
cttgtcaattacactaactacagctggtggtcagaggtgcatcaaacaccaaagaggcac
agtctttccagtactaaattgctgagccctcagatatctggagacagtgatgaatttgat
tcggaatccaaatttggcatgtgcaatcgagagatagtacgaagaggagcactcattctt
ttttgtgactatgtttgtcaaaacctacatgattcagaacacttgacatggcttatagtg
aatcatgttcaagatctgattaatctgtctcatgagcctcctgtacaagactttattagt
gctgttcataggaattcagcagccagtggtctcttcatccaggctattcagtctcggtgt
gagaacctcgcaactccaacaacactaaagaagaccctgcaatgcttagagggcattcat
ctcagccagtctggtgctgtgttaatgttgtatgtggacaagcttttgtgtactccattc
cgtgtgctggctcgcatggttgacacacttgcttgtcgtcgagtagaaatgcttttggct
gcaactttccagaacagcgtttctcagttaccagttgaagaactggatagaattcaggaa
tatcttcaaaacagtggattagcaccaagacaccaaagactttactcgctattggacagg
tttcgccttacagtagctccagaaacaactagcccttcacctttggttacttcacaccca
ctggatggggaaaaccaaccagccttagagaatgtaattccagacaaagactggtatgta
tcactagtcagatcacagtgctgggtcaggtcagactctgcactgctggaaggtgcagag
ctggtgaataggatacctcagcctgaactaaactccttcatgaccagtaaggagttcaac
ttaagcttattagctccctgtttaagtcttggcatgaacgaaatctcagaagaccaaaag
agcagcctctttgaaactgcccatagggtaaccctagaccacgtgtgtaacattgttcaa
aaacttcctgccagccatcaagtttttcagccattgcagccagctgagacttcagcctat
tggagcaagctaagcgatatttttggagacacgatgctgtatcagactgtgatgaaactc
tctcgtgcactggctcagtatttgtcgttactctctaaattaccagcatctctctgtatt
ccacctgacaaagagagtgacatcctgaagtttgtagtaatgtcattagaggcactgtca
tggcatttaatacatgaacagattcctctaagtatagatcttcaagctgctttggaatgc
tgctgcctaacattacagcaacctggtctctggaatttgctggcttctgcagtgtatgtg
acacaggcttgctccctaattaattgtgtcagatttataatagaggcagttgcaattgaa
cctggaaaccagcttcttagtccagaaaggaagaagaatacttcaaaaggggtcagtgag
gatgaagttgattcaaatgctcaaacgaaatatattacaacagcttgtgaaatggtggct
gaaatggtggagtgtttacagactgtcttgacgtgcggacataagagaaacaacagtatc
ccagcatttctcactcctgtccttaagaacataatcatcagcttgggtagactgcctcta
gtaaacagctacacaagagtacctcccttggtctggaaactaggctggtcaccaaaacct
gcaggtgattttggcacagcttttccagaaattcctgtagaatttcttcaagaaaaagaa
atctttaaagagttcatctatcgcattaatacattggggtggactagccgtacccagttt
gaagaaacctgggctactctccttggtgtgcttgtaactcaaccaattgtaatggaccaa
gaagaaagtcaacaagaggaagacacagagaggacccaaattaatgttcttgcagtacaa
gccataacctccttggtgctgagtgcaatgacaataccagttgcaggcaatccagcaatt
agctgcttggaacagcagccccgcaataaagctttaaaagttctggataccaggtttggg
agaaagttaagtgttatcagaggaattgtggaacaagaaatccaagcaatgatatctaag
agggataatattgccacgcaccatttttatcaagcatgggaccctgttccatcactttct
cctgctaccacaggtggtcttatcagccatgaaaagcttttactgcagatcaatactgag
cgagaaatgggaaacatgggctataaactaggacaggtttctatacactccgtgtggcta
ggaaataacatcactccattgagagaagaggagtgggatgaagatgaagaagatgaaagt
gatatgcctgctccttcttcaccaccaacctctcctattaactccaggaaacaccgggct
ggggttgatatacattcttgttctcagttcttgcttgaactgtacagtcaatggatattg
ccatcaaatcctagcaagagaacgccagtcattctgattagtgaagtggtgcgatcactt
ttggcagtgtctgacttgtttacagaaaggaatcaatttgagatgatgtacaccacattg
acagaattgcggaaggtgcatccatcagaagatgagattcttattcaatatttggtacca
gccacatgtaaagcagctgctgttcttggaatggataaagctgtagctgagccagtaagc
cgtctgttggaatcaacactacgcagcacccatatgccaagtcggattggagctctgcat
ggaattctttacattcttgagtgtgacctgcttgacgaaacagcaaagcaactcattcca
attatcagcgagtatttgctttccaatctgagagggatagcccactgtgtaaatgtccat
aaccaacagcatattttagtgatgtgtgctgcagcattctacttgatagagaattaccca
cttgatgtagggcctgaattctctgcaggaattatacaggtctgtggcgtaatggtgtct
ggaagtgatgaatcaactccatccattatttaccattgcgtcctcagaggattagaacga
ctcctcctttcagagcaactttctagactggatagtgaatctttagttaaactaagtgtt
gatagagtgaacatacacagcccccacagagcaatggcagccttggggttaatgctgact
tgcatgtatacaggaaaagagaaaatcagcccaagtcgtgcaacagatgcaaatcccaca
gctccagacagtgagtctgttattgtagctatggaacgggtgtctgttctttttgatagg
atccggaaaggatttccttttgaagctagagtagtggcacggatcctccctcagttccta
gatgactttttccctccacaggatgtaatgaacaaagttattggagaatttttatccaac
cagcagccatacccacaattcatggctacagtagtttataaggtttttcagacactacat
accactggacagtcaccaatggtccgtgattgggtgatgctctctctctccaacttcaca
cagagaacgcctgttgcaatggcaatgtggagtctttcctgtttttttgtcagtgcttcc
accactcagtgggtttcagcaattcttccacatattatcagcagaatgggaaaatcggag
caagtggacattaacctcttctgtttggtggccatagacttttacagacaccagatagat
gaggaactagatcgaagggccttccagtctgtgtttgagatggtagcatcgccaggaagc
ccatatcatcgcctgctaacttgcttgcaaaatgttcacaagatcacggcatgctga
DBGET
integrated database retrieval system
