Mauremys reevesii (Reeves's turtle): 120407146
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Entry
120407146 CDS
T07797
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04010
MAPK signaling pathway
mrv04020
Calcium signaling pathway
mrv04144
Endocytosis
mrv04510
Focal adhesion
mrv04540
Gap junction
mrv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120407146 (PDGFRA)
04020 Calcium signaling pathway
120407146 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120407146 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120407146 (PDGFRA)
04540 Gap junction
120407146 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120407146 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mrv01001
]
120407146 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mrv04090
]
120407146 (PDGFRA)
Enzymes [BR:
mrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120407146 (PDGFRA)
Protein kinases [BR:
mrv01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120407146 (PDGFRA)
CD molecules [BR:
mrv04090
]
Proteins
120407146 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
120407146
NCBI-ProteinID:
XP_039398504
LinkDB
All DBs
Position
LG5:complement(88711860..88757772)
Genome browser
AA seq
1121 aa
AA seq
DB search
MRIALAPPSASSCDCVVCQPWSVPGLRRFELSTVMGTSPRTVLLLGCLLTGPWLTFCQLP
LPTVLPNRDEMVVQLNASFTLKCSGDSEVTWQYPMAEGSPRIDIRNEENNSGLFVTLLEV
GNASAAHTGLYTCYYNHTQEEDGEVEGKDIYIYVPDPDMPFVPLLPEDQFILVEDGDSTI
IPCRTSDPNAQVALVNSEAKVVYAYYDSKQGFLGNFPAGSYTCQTTVKEVEFKSDQFFIY
ILKATSELPVEIEALKTVYKTGETIVVTCVVFDNEVVNLQWNYPGKVKEKGVIKVDDIKV
PSQKLVYTLTIPEASVKDSGDYECTARHATKEVKENKRVVITVHDKGFIHLDPQFSPLEA
VNLHEVKNFVVDVQAYPAPKMFWLKDNVTLTENLTEIVTSSNKINETRVQSILKLIRAKE
EDSGDYTLVAENGEETKSYTFSLLIQVSASILELVDDHHGSGGGQTVQCLAKGTPFPDVE
WLICKDIKKCSNDTSWMLLTNNISDIHMEAHRVDKDQVESQVTFQKVEETLVVRCMARNT
LGAVTRELKLVAPALQSELTVAAAVLVLIVIVIISLIVLVIIWKQKPRYEIRWRVIESIS
PDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAV
KMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYL
HKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSYVILSFENNGEYMDMKQADTTQYVPML
ERKEGSKYSDIQRSMYDRPASYKKKSVSEPEVKNLLSDDNSDSLSLLDLLSFMYQVARGM
EFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPES
IFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSSFYNKIKSGYRMAKPDHATSEVY
EIMVKCWNSEPEKRPSFYHLSEIVENLLPGEYKKSYERIHLDFLKSDHPAVTRMRVDCDN
TYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIPLPDIDPVSEDELGKRNRHSSQTSEES
AIETGSSSSTFIKREDETIEDIDMMDDIGIDSSDLVEDSFL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcgctcgccccaccgagcgcgtccagctgtgactgcgtcgtgtgtcagccg
tggagcgttcccgggttgagaaggtttgagttgtccacagtgatgggtacttccccaagg
acagtcctgctcctgggatgtctcctgacaggaccatggctaactttttgccagcttcca
ttgccgactgttcttccaaatagagatgaaatggtcgtgcagctgaatgcctcatttact
ctgaaatgctctggagacagcgaagtgacctggcaatacccaatggctgaaggaagcccc
agaatagacattagaaatgaagagaacaacagcggtctctttgtgactttgctggaagtg
gggaatgcctcagcggctcataccggattatacacttgttactacaatcatactcaagag
gaagatggggaggtggaggggaaggatatctacatctatgtgcctgatccagatatgccc
ttcgttcctctactaccagaggatcaattcatcctagtagaagatggtgattccaccatt
atcccttgtcgtacaagtgaccctaatgctcaagtagctttagttaacagtgaagccaag
gtcgtatatgcctattatgacagcaaacaaggctttctgggaaattttcctgcaggctca
tacacgtgccaaacaactgttaaagaagtggagttcaagtcagatcagtttttcatctac
attttgaaagctacttcagagctgccagttgagattgaggcccttaaaactgtatataaa
acaggcgaaacgattgttgtaacttgtgtggtctttgacaacgaggtggttaatttacag
tggaattatccagggaaagtgaaagaaaaaggtgtgataaaagttgatgacattaaagtt
ccatcccagaagctggtttacactttgaccattcctgaggcttcagtgaaagattctggg
gattatgaatgtacggcccgacatgcaaccaaggaggttaaagaaaataagagagtagtc
attacagttcatgataaaggattcattcatctggacccccaatttagccctttggaagct
gtcaatttacatgaggtcaaaaattttgtagtggatgtgcaggcatacccagctccaaaa
atgttctggctgaaggacaatgtgactctgactgagaatcttacagaaattgttaccagt
tcaaacaagatcaatgagacaagggtccaaagtatattaaaactgattcgggccaaggaa
gaagacagtggagattatactttggttgccgaaaatggagaagagactaaaagctatact
ttctcattgctaatacaagtttcagcttcaattctagagctggtggatgatcaccacggc
tctggagggggacagacggtccaatgcttggcaaaagggacacctttccctgacgtggaa
tggctgatttgcaaggacattaaaaaatgcagtaatgatacctcatggatgcttctgact
aacaacatctcagatatacacatggaggctcatcgggttgataaggaccaggtggaaagc
caggtgaccttccaaaaggtagaagaaaccctggtagtacggtgcatggcgaggaacact
cttggtgccgttactcgggaactgaagcttgtggctcctgcattgcaatcagaattaact
gtggctgcagcagtcctagtgttaatagtgattgtgattatttcactgattgtcctggtc
atcatatggaaacagaaaccaaggtatgagataagatggagagtcattgagtctatcagc
cctgatggccatgagtacatttatgtggatccaatgcaactgccctatgactcaagatgg
gagtttcctagagatggattagtacttggtcgaatccttggttcaggtgcatttgggaaa
gtagttgaaggaactgcatatggattaagtcgctctcaaccagtgatgaaggtagctgtg
aaaatgctgaaacccacagctagatccagtgaaaaacaggcactaatgtctgaattgaag
ataatgacacatcttgggcctcatttgaacattgtgaatctcttaggagcttgtactaaa
tcaggtccaatttacatcattactgaatactgcttttatggggatttggtaaactacctg
cataaaaacagggataatttcctgagccgacatccagaaaagccaaagaaggacttggac
atttttgggatgaacccagctgatgaaagcacaagaagttatgtcattttatcctttgaa
aacaatggagaatacatggacatgaaacaagctgatacaactcagtatgtgccaatgctg
gaacggaaggagggttctaagtattcagatatccagaggtcaatgtatgatcggcctgct
tcatataagaaaaaatctgtgtcagaaccagaagtcaaaaacctgctttctgacgacaat
tctgacagcctcagtttgctggatttactaagcttcatgtaccaagttgcacgggggatg
gagttcttggcttctaaaaattgtgtgcaccgtgacttggcagctcgtaatgtccttctg
gctcaaggaaaaattgtgaagatctgtgactttggtctggctagggacatcatgcatgat
tccaactatgtctccaaaggcagcacttttctcccagtgaaatggatggcacctgaaagc
atttttgacaatctgtacacaacattaagtgatgtctggtcttatggcattctgttgtgg
gagatattttctcttggtggcacaccgtaccctggcatgatggttgattcttctttctac
aacaagataaaaagtggctatcgaatggcaaaacctgaccatgccaccagcgaagtgtat
gagattatggtgaaatgttggaacagcgaaccggagaaaagaccttctttttaccatttg
agtgaaattgtggagaatctgttgcctggcgaatacaagaagagctatgaaaggattcat
ctggacttcctgaaaagcgaccacccagcagttacacgcatgagagtggactgtgacaac
acctacatcggtgtcacttacaagaatgaagacaagctaaaggacagggagagtggattt
gatgagcaaaggttgagcgctgacagtggctacatcatccccctgcctgacattgatccc
gtttccgaagatgaacttggcaaaaggaacaggcatagttcccagacatctgaagaaagt
gccattgagactggttcaagcagctctacctttatcaagcgagaggatgagaccattgag
gacattgacatgatggatgacattggaatagattcctcagacctggttgaagacagcttc
ctgtaa
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