Mauremys reevesii (Reeves's turtle): 120407729
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Entry
120407729 CDS
T07797
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrv03000
]
120407729 (SOX5)
Transcription factors [BR:
mrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120407729 (SOX5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Cob_adeno_trans
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120407729
NCBI-ProteinID:
XP_039399613
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All DBs
Position
LG1:complement(242036069..242898325)
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AA seq
811 aa
AA seq
DB search
MSEERELWGGACSGWLALGTRILGESSIGETLADIATVANSTLPDMACVLRMSSKRPASP
YGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQESCGHRT
PTSQHSTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQSGESLSSTALGTPERRKGSLADV
VDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQL
MGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKI
NLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPT
TMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTN
SPPPKSKDEVAQPLNLSAKPKTSEGKSPTSPTSPHMPALRINSGASSLKSSVPATLASPS
ARVNTIDILSSITSSGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNC
RTEKDKTTLESLTQQLAVKQNEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSN
EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARL
SKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIAT
AGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQANDIN
GEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagcgagagctgtggggaggtgcttgttcaggttggttggcccttggcaca
aggatattgggtgaaagtagcattggggaaaccttggctgacatagctacagtagccaac
tctacattacctgacatggcatgtgtgctgaggatgtcttccaagcgaccagcctctccg
tatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaagaagag
gagagtgacgggctcccagcctttcaccttcccttacatgtgagttttcccaacaagcct
cactctgaggaatttcagccagtttctctgctgacgcaagagagttgtggccataggact
cccacttctcagcacagtacaatggaagttgatggcaataaagtgatgtcttcatttgcc
ccgcacaactcatctacctcaccattgaaggcagaagaaggtgggcgtcagagtggagag
tcattgtccagtacagccctgggaacccctgaaaggcgtaaaggcagcttagcagatgtt
gtagacaccttaaagcagagaaaaatggaagagctcatcaaaaatgagccagaagaaact
cccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgggatca
gggaactttggagaaataaaagggactccagaaagcctagctgagaaagaaaggcagctt
atgggtatgatcaatcaactgaccagtttgcgtgagcagctgctggcagctcatgatgaa
cagaagaaactggctgcatcacaaattgagaaacaacgccagcaaatggagctggctaag
cagcaacaggaacagattgcaagacaacagcagcagctcctgcagcagcaacacaaaatt
aaccttcttcagcagcagatccagcaggttcaaggtcagctgcctccattgatgattcca
gtgttccctccagatcaacgaactctagcagcagctgctcagcaaggattcctccttcct
cctggtttcagctacaaggcaggatgcagtgacccttaccctgttcagctgatcccaact
accatggcagctgctgccgcggcaacaccaggcttaggcccactccaactgcagcagttg
tatgctgcccagcttgctgcaatgcaagtgtctccaggaggcaagatacctggcataccc
caaggcaaccttggtgcggctgtatcccctaccagtatccacacagacaaaagcacaaac
agtcctccacccaaaagcaaggatgaagtggctcagccgctgaacctctcagctaaaccc
aagacgtctgagggaaagtctccgacatcgcccacttctcctcatatgccagctctgaga
ataaacagtggggccagttcactcaaatcctcagtgccagcaacattagccagtccctcg
gccagagttaacacaatagatattctttcttctatcacgtcgtcaggttatttaaatgac
catgatgctgttaccaaggcaatccaggaggcccgacagatgaaggagcaacttcggagg
gaacaacaggtgcttgatgggaaggtggctgttgtgaatagtctgggtctcaataactgc
aggacagaaaaggacaaaacaacactggagagcctgactcaacagctggcagtaaaacag
aatgaagacgggaaatttagccatgctatgatggatttcaacatgagtggggattctgac
ggaagtgcaggtgtctcagaatctagaatttatcgggaatccagagggcgtggaagtaat
gaaccccatatcaagcgtccaatgaatgccttcatggtgtgggctaaagatgagcgaagg
aagatccttcaagccttccctgacatgcacaactctaacattagcaagatactgggatct
cgctggaaagctatgacaaacctagagaagcagccatactatgaagagcaggcccgactc
agcaagcaacatctggagaaatacccagactataaatacaagcccaggccgaagcgcacc
tgtcttgtggatggcaaaaaattgcggatcggcgaatacaaggcaatcatgcgcaacagg
cgacaagagatgaggcagtattttaatgttgggcaacaagcacagattcctatcgccacc
gccggtgtagtctacccaggagccatcgcgatggcaggaatgccctccccccatctgcca
tcagagcactcgagtgtgtccagcagcccggagcccgggatgcctgtcatccagagcact
tacggcatcaaaggcgaggagccgcacatcaaagaggagatgcaggccaatgacatcaat
ggagaaatctacgacgagtacgacgaagaagaggacgaccctgatgtggactacggcagt
gacagtgaaaatcacattgcaggacaagccaactga
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