Mauremys reevesii (Reeves's turtle): 120407861
Help
Entry
120407861 CDS
T07797
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120407861 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrv04121
]
120407861 (LMO7)
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120407861 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
DUF6288
PDZ_6
PDZ_2
Flot
Motif
Other DBs
NCBI-GeneID:
120407861
NCBI-ProteinID:
XP_039400040
LinkDB
All DBs
Position
LG1:83817950..84005153
Genome browser
AA seq
1753 aa
AA seq
DB search
MEGREDAEGSCDVAFAEAQRWVEAVTGKSFGTKDFRAALENGVLLCDLINKIKPGIIKKI
NRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSSRVTVKQEETNRRLKNVLIT
LYWLGRKAQNKSGYNGPHLNLKAFEKLLGQALTRALEESSSLKSSGRDSGYGDIWYIDRG
EAFSPSTSHKRDDSFDSLDSFGSRSSTSFSSDITLKGSSEGCESDTDSELPYKMHDSGKD
NMSYRRIAVVEPKPTTDFNRFLPSNRKQAPYMPAPLRKKRIEKNEDNRRSWASPVFTEPD
GTFSSNQRRQRHLDPKEESKPKVNISSKFSGYSDDEEEKTVGIPNIEKDDLYVRKLNSAV
SNPMVSFDKFLPKFWTPEEELHWKNIKKGSSSKPWYKELQGFSRRKADSEDEDSANKQSN
AKPTADYVGKSLSQIAEGGITYASDQPSQFSLLQTLQKYSDDYLSSEMKTKIDPTSGPRV
ITCRKNIFFTPGCNQRETMNGDLYPDLENDDLFVRKTGAFHINPIALQAFEYFRKSSEQE
PLLEGEIILQPREGQPVIPDLEKDDMTVRKVQTQKKGVPLSGAPDKYHPALFPDPWSLPP
EIQSKFLCLLDKTITTEDEKNGGRVLSPSLQQKKDDMLTRKIESWKVGSVLQPVSFTPGP
CSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEDGSKSLNDVSIDEGQVMRQVHYEE
LQKIKSKLQEQDQQWQDDLAKWKNRRKSFTSDLQKKKEEREEIERRASENSERNSKSLKE
MQQDRENRDQGSYRDIQQKSERRRMHSSDDVFSEEKPPSRSSVAKDYLVEKDASYSFKKN
EESYAAQTNNENSQKPEIYATVETQIPSKSLLEEQSSVPLSTHPSVNAQMGSARVSASLP
RNYQKTDSSRLTSVVTPRPFGVPSRGISSLPRSFTVDDAQKYNGEVDGAKRSQSLLTSYS
FSTMEAGPLLSADAMTSGGKEEKESIKITVSPALRASATSQYQDAVSPGLKSEYYTHSDP
ITVASSAEIRSLPEPEVSVSQDQYSEMRISINQRPGNSRNFGFTTNWKPSGVFIQTIEEG
STADLGQLQVDDEIIAVDGTRVSQMDHNQWEKAMANALETGNLVMDIRRYGKNDWGKDQP
SLPYVRHKILNLTSMATNIVGTPENKWIDATSGDQNSTNSSNISAKRDFSYSLQNSDTGA
KVINGMQADLSSNEQKESEPISLKNLKRRSQFFEQGGSEPAVSDLPVPSINAPSRWTWDQ
EEERKRQEKWQKEQERLLQEKYRREQEKLREEWLQAQQEAERESSKYLDEEPTALTLNTV
SVTAHAPPISSWRTNMGEDTDAPEGGRRHEWGEQQQNEEEKEMERQRLQEERRLQEEKAL
HLEQKRKAQELELEREWKAKEQQYAEEQKRRAEAEEQKRRAEAEEQKRRAEAEEQKRRAE
AEEQKRLMEKEREIPMQMPQYRRHYDHYEVSQNFEDPSGHFLADRNKSRSTSELDDYPRS
RNGTNNKYLERSWNVSDSQKGSQKERAPSTAEIERQHILQEMRKKTSLHTDNSWIRQRSS
SVHKDPVNLHKNTMKRGESLDNLDSARTSSWRRSSWMNQSASSTSSSQDFGRSAAPLVST
SNRAYMRTPSSSVAPPSASSGRSATSSHTFPSAPSSVPRAQSPTSAFQSGAQQRNKSVSG
KKICSYCNNVLGKGAAMIIESLGLCYHLRCFKCAACACDLGGSHSGAEVRIRNNELFCND
CYVRFKTGQPTAM
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagagaagatgccgagggcagctgcgatgtagcttttgctgaagctcagaga
tgggtggaggcagtcaccgggaaaagttttggaaccaaagattttcgagccgctttagaa
aacggagtcctgttgtgtgatttgattaacaagatcaaacctggcatcattaagaagatc
aatcgtctatctactccaatagctggtttggataatataaatgtttttctgaaagcttgt
gaaaatattggattgaaagaagctcagctttttcatcctggtgatcttcaggatttgtcc
agtcgagttactgtcaagcaagaggagaccaatagaagacttaaaaacgttttgattaca
ttatactggctggggaggaaagcacaaaacaagtctggttacaatggtccacaccttaac
cttaaagcatttgagaaattactaggacaagctctgaccagggccctcgaagaatctagc
agtctgaaaagcagtggcagggacagtgggtacggtgatatttggtacattgaccgtgga
gaagcattttcaccttccactagccataaaagagacgattctttcgatagcctggactcc
tttggttcaagatcttccacaagcttttcatcagatataaccttgaagggtagcagtgaa
ggttgtgaaagtgacacggactctgaactgccttacaaaatgcatgattctggcaaagat
aacatgtcatatcgcaggattgctgtggttgaaccaaaacctactacagacttcaatcgg
ttcttacccagcaacaggaaacaggcaccatatatgccagcaccgctcaggaaaaaaagg
atagagaagaatgaggacaacagaagaagctgggcaagtcctgtcttcactgagccagat
ggaacattttcaagtaaccagaggaggcagaggcatttggaccctaaagaggaaagcaag
ccaaaagttaacatttcttcaaaattctccggctattctgatgatgaggaagaaaagaca
gtaggcatcccaaacattgaaaaagatgatctctatgttcgcaaactaaattctgcagtt
tcaaacccaatggtttcttttgacaagtttctacctaagttttggactccagaagaagaa
ttgcattggaaaaacatcaaaaaaggatcctcttccaaaccatggtataaggagcttcag
ggattcagtagaaggaaggctgattctgaggatgaagattcagccaataaacaaagcaat
gccaaaccgactgctgattatgtggggaaatcattgtcccaaattgcagaagggggaatc
acatacgcctctgatcaacccagtcagttttcattacttcagaccctccaaaaatactct
gatgactacttgtcttctgaaatgaagaccaaaattgatcctacttctggccctagggtc
ataacatgcagaaagaatattttttttacgccaggatgcaaccagagggaaactatgaat
ggagacctatatccagacttggaaaatgacgatttgtttgttcggaagactggggctttc
cacataaatccaattgctctccaagcttttgaatactttagaaaatcctctgagcaagaa
cctcttctagagggtgaaataattctgcaacccagagaaggccaacctgttattccagac
ttagaaaaagatgacatgactgttcgtaaagtacaaacacagaaaaaaggggtgccttta
tcaggtgctccagacaaataccatcctgcactctttcctgatccttggagcctcccacca
gaaatccaatccaaatttctttgtttacttgacaagactatcacaacagaagatgaaaaa
aatggtggtagagtcttatcaccctctttgcagcagaagaaggatgatatgctgactcgc
aagattgagtcttggaaagtaggaagtgttctgcagccagtcagttttactccaggtcca
tgcagcgaagaagactggaaaaaatgggaggctatcagagaggccagcaaagttagacac
aagaaacgccagatggttgagagactgtttcaaaagctttctgatgaggatgggagcaag
tctttgaatgatgtcagtatagacgaaggccaagttatgcgccaggttcattatgaagag
ctacagaaaataaaatccaagctacaggaacaagatcaacaatggcaagatgatctagca
aaatggaaaaatcgtcgaaaaagtttcacttcagatttgcaaaagaaaaaggaggagaga
gaagaaatcgaaaggagagcctctgagaattctgaaagaaatagcaagtcactgaaagaa
atgcagcaggacagggagaacagagatcaaggatcctaccgggacatccagcaaaaaagt
gaacgcaggcgaatgcattcatcagatgatgtatttagtgaagaaaaacctccttccaga
tcatcagtagcaaaagattaccttgttgaaaaagatgcctcttacagctttaagaagaat
gaagaatcatatgctgcacaaactaacaatgagaattctcaaaagccagagatctatgca
acagttgaaactcaaattccatctaaaagcctattagaagaacagagctcagtccctttg
tctactcacccttcagtgaatgcacaaatggggtcagctcgggtttcagcttctctcccc
agaaattaccagaaaactgatagctctaggttaacatctgtggttacaccaagacctttt
ggtgtcccctcaagaggaatctcatcacttcccagatcatttacggtggacgatgcccag
aaatataatggagaagtagatggagctaagagatctcaaagtttgctcacgagctattca
ttttcaacaatggaagcaggaccacttctctctgcagatgcaatgacaagtggtggcaag
gaggaaaaggaaagcattaaaataacagtgtctcctgcactgagagcctctgctacatcc
caataccaggatgcagtgtcccctggtcttaaatcagagtattatactcattctgaccct
attacagttgcatcttctgcagaaataagaagcctgccagagccagaggtttcagtgtca
caggaccagtacagtgaaatgagaatcagtataaaccagagacctggtaacagtcgcaac
tttgggttcaccacaaattggaaaccttctggggtttttatacaaacaattgaagaaggt
agcactgcagaccttggccagctgcaagtagatgatgaaatcattgctgttgatggcaca
agagtttcacaaatggaccataatcagtgggagaaagccatggccaatgcactagaaact
ggaaacctggtcatggatatcagacgatatggaaaaaatgattggggcaaagaccagcct
tccctgccatatgtaaggcataaaatcctcaatctcaccagtatggctaccaacattgta
ggtacacctgaaaataaatggattgatgcaacttctggagatcagaattctacgaactct
tcaaacatatcagccaaaagagatttctcctacagccttcaaaattctgatactggagca
aaagtgataaatggaatgcaagcagatctgagctctaatgaacaaaaagaatctgaacct
atttctttgaaaaacttaaaaagacggtcacaattttttgaacaaggaggctcagagcct
gcagtgtctgatctcccggttccgtctattaatgctcctagtcgttggacttgggaccaa
gaagaagagagaaaacgacaggaaaaatggcagaaagaacaggaacgtttacttcaggag
aaatacagacgtgaacaggagaaattgcgggaagaatggctacaggctcagcaagaagca
gaaagagagagttccaaatatttagatgaggagccgactgccctaaccttaaacacagta
tcggtaactgcacatgcaccacctatttctagctggagaacaaacatgggagaagacact
gatgctcctgaaggaggcagaagacatgaatggggggaacagcagcagaatgaggaagag
aaggaaatggaaaggcagagactccaggaggaaaggagacttcaagaggaaaaagccctg
catttggagcaaaaaaggaaagcccaagaactagagcttgaaagagagtggaaagcaaag
gaacaacagtatgctgaggagcagaagcggcgggcggaggctgaggagcagaagcggcgg
gcggaggctgaggagcagaagcggcgggcggaggctgaggagcagaagcggcgggcggag
gccgaggagcagaagcggctcatggaaaaagaaagggagataccaatgcagatgccccaa
taccgaagacattatgaccattatgaagtatctcaaaactttgaagatccatctggacac
tttcttgctgacagaaataaatccagatcgacttcagaactggatgattaccccagaagc
agaaatggtacaaacaacaaatatttggaaaggtcctggaatgtcagtgattcacagaag
gggtctcaaaaagagcgtgccccgtctacagcagaaatagagagacaacatatccttcag
gaaatgagaaaaaaaacgtcactacatactgacaacagctggattaggcagcgtagttct
agtgtgcataaggaccccgttaatctacacaagaatacaatgaagagaggtgaatcgtta
gataatcttgattccgcaagaacaagttcatggagacgttcatcttggatgaatcaatct
gcctcttccacatcatctagtcaagattttggtcgatctgctgctccactagtgtctact
tcgaacagagcttacatgcgtaccccctcctccagtgtagcacctccttcagccagctct
ggaagatcagccacttcttcccacactttcccctcagcaccttcttctgtaccgcgtgct
cagtctcctacctctgctttccaatcaggagcccagcagcggaacaagtcagtcagtggg
aagaaaatatgttcatactgtaataacgttctgggcaaaggagcagccatgatcatcgaa
tctcttggtctttgttatcatttacgttgttttaagtgcgcagcttgtgcatgtgacctg
gggggctcacactcaggagctgaagtcaggatccgaaacaatgaactcttctgcaacgac
tgctatgtcagatttaaaactggacagccaaccgccatgtga
DBGET
integrated database retrieval system
