Mauremys reevesii (Reeves's turtle): 120408100
Help
Entry
120408100 CDS
T07797
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120408100 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120408100 (SMARCA2)
03036 Chromosome and associated proteins [BR:
mrv03036
]
120408100 (SMARCA2)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120408100 (SMARCA2)
Chromosome and associated proteins [BR:
mrv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120408100 (SMARCA2)
Chromatin remodeling factors
BAF complex
120408100 (SMARCA2)
PBAF complex
120408100 (SMARCA2)
GBAF(ncBAF) complex
120408100 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120408100
NCBI-ProteinID:
XP_039400584
LinkDB
All DBs
Position
LG6:complement(88958009..89127844)
Genome browser
AA seq
1573 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHSMPSM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDMHCSSMKSASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPHMPPSQPGPMIPGDPQVMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQAPANYSRLPVAGIGVHSIPGP
PTGPGPASGVPGHAAAMTPKSWAEGQGPDMNVASTPQKLAVPPPSGRPSPAPPAAQPSAA
MPGPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQEL
ENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ
TLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA
TWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT
NLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSDLGPDGEPIDESSQMSDLPVKVTHTE
TGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEEESDSEYEEEDDDEESSRQEVDEKI
LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSSYYTVAHAIAERVEKQSALL
INGSLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII
VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI
LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP
EKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHP
YMFQHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLM
TIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAAD
TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI
QAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMD
RRREDARNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDA
LTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPN
PPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIR
NHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESEDESN
DDEEDDEEDESESESKSVKVKIKLNKKDEKGRDKGKGKKRQSRVKAKPVVSDDDSDEDQD
ENDQSEASGSDDE
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctggcgcaatgcctcatcctggcccttccccggggccaggc
ccatcacctggaccaattctaggacctagcccaggaccaggaccctctccaggttcagta
cacagcatgatgggaccaagtcctggaccccctagtgttccacattcaatgcccagtatg
gggcccactgattatccacaggaaggcatgcaccaaatgcacaagtccattgatggcttg
catgaaaaaggaatggttgaagacatgcattgtagctccatgaagagtgcaagtatgaga
ccgcctcaccccggaatgggcccaccacagagtccaatggatcagcatagccaaggttat
atgtctcctcacccatctcctttgggagcaccagaacatgtgtccagcccaatgtctgga
gggggcccaactccaccccacatgccaccaagtcagccaggacccatgataccaggagat
ccacaggtcatgagccagcccagcaggggtccttcaccttttagccctgtccagctgcac
cagctccgggctcagattctagcttacaaaatgttagctagaggccagcctttacctgaa
aacctgcaacttgctgttcaagggaagaggacattgcctgggattcaacagcaacaggct
cctgctaactacagcagactacctgttgcaggtattggggtgcattcaattcctggtccc
ccaactgggccaggacctgcttcaggagtgccaggacatgcagccgccatgacccctaaa
tcttgggcagaaggtcaaggcccagatatgaatgttgccagtacaccacaaaagcttgct
gtaccacctcctagtggaaggccttcacctgcccctcctgctgctcagccttctgcagcc
atgcctggtccttctgtaccacagccaacacctggacagccttcacctatcgtccagctg
cagcaaaaacagaaccgtatcagccccatccagaagccacaaggattggatcctgttgaa
atactccaggagcgtgaatacagacttcaggctcgaattgctcacagaatccaggaactg
gagaatttacctggctctctgcctcctgatctgcgaaccaaagctacagttgagctgaag
gcacttaggttactgaattttcagcgccagctaagacaagaggtggtggcctgcatgcgc
cgtgacacaacactggagacagcactgaactccaaagcctacaagcgcagcaagcgccag
actctgagggaagcccgcatgacagaaaagcttgagaaacagcagaaaatcgaacaggag
agaaaacgtagacagaagcaccaggaatatctgaacagcatattgcagcatgctaaagat
tttaaagaataccaccggtcagtggctgggaaaattcagaaactttctaaagctgtggca
acgtggcatgccaatactgagcgtgagcagaagaaggaaacggagcgaattgagaaagaa
agaatgagaagactgatggctgaagatgaagaaggctaccgtaagctgattgatcagaag
aaagacagacgtctggcatacctgctgcagcagacagatgagtatgtggccaacctgact
aatctggtttgggagcacaagcaagcacaagctgccaaagaaaagaaaaagaggaggaga
agaaagaagaaggcagaagagaatgcagagggaatgggatctgatcttggtcctgatgga
gagcccattgatgagagcagtcaaatgagtgaccttccagtcaaagtgactcacactgaa
acaggcaaagttcttcttggaccagaagctccaaaagcaagtcagctggatgcttggtta
gaaatgaatcctggctatgaagtagctcctaggtctgacagtgaggaggagagtgactct
gaatatgaggaagaggatgatgatgaggaatcaagtagacaagaagtggatgagaaaata
ctcctggatcctaacagtgaagaagtttctgagaaggatgctaagcagatcattgagaca
gccaaacaagatgtggatgatgaatacagtatgcaatatagtgctagagggtctcagtcc
tcctactatacggtcgctcatgcaatcgctgagagggtggagaaacaatctgctcttctt
attaatggatcactaaaacattatcagatccagggcctggaatggatggtttcactttat
aataacaatttgaatggaattttagctgatgaaatggggctaggaaagaccatacagact
attgcactcatcacttatctgatggagcacaaaagactcaatggcccctatctcatcatt
gttcccctttcgactttatccaactggacatatgaatttgacaaatgggctccttctgtg
gtgaaaatttcttacaaggggacacctgccatgcgtcgttcacttgttcctcagcttcga
agtggaaaatttaatgttcttttaactacttatgaatacataataaaggataaacacatt
cttgctaagattcgatggaagtacatgatagtagatgaaggccatcgaatgaagaaccat
cactgcaagctgactcaggtcttgaacacccactatgtggctcctagacggattctgttg
actgggacaccactgcagaacaagttgcctgaactttgggctctcctcaacttcctcctc
cccaccattttcaagagctgcagcacctttgaacagtggtttaatgctccatttgccatg
actggagaaagggtggacttaaacgaggaagagactattctgatcatcagacgtctccac
aaagtgttacgacccttcttgctgaggagactgaagaaagaggttgaatctcaactgcca
gaaaaggttgaatatgtgatcaaatgcgacatgtcagctcttcagaagattctctaccgc
catatgcaagcgaagggaatcctcctcacagatggctctgagaaagacaagaagggaaaa
ggtggggcgaaaactcttatgaacactatcatgcaattgagaaagatatgcaatcaccca
tatatgtttcagcatattgaggagtcctttgctgaacacttgggctattcaagtggtgtt
atcaatggagccgagctttatcgggcctcagggaagtttgaactacttgatcgtattcta
ccaaagttgcgagccactaatcaccgtgtgcttctcttctgtcaaatgacatccctcatg
accattatggaggactattttgcttttcgaaatttcctttaccttcgccttgacggtaca
acaaaatcagaggatcgggctgctctgctgaagaagttcaatgagcctgggtcacagtac
tttatcttcttgttgagcacaagagcgggaggcctgggcctgaatcttcaggctgctgac
actgtcattatctttgacagtgattggaatcctcaccaggatttgcaggcacaagacaga
gctcaccgaataggtcagcagaatgaggttcgagttctgaggctgtgcactgttaacagt
gtggaggagaagatacttgctgctgccaagtataaactgaatgtggatcagaaagttatt
caggccggcatgttcgatcaaaaatcttcaagccatgaacggagggcttttctacaggct
atattggaacatgaggaagaaaatgaggaagaagatgaagttcctgatgatgagactctg
aatcagatgattgcgcgacgtgaagaggaatttgatctcttcatgcgtatggacatggat
cgtcgcagagaggatgcccgaaatcccaagcgcaagcctcgcttgatggaggaggatgat
ctgccatcctggattattaaagacgatgctgaagtagaaaggctcacctgtgaggaagag
gaagaaaaaatatttgggagggggtcccgtcagcgcagagatgtggactacagtgatgct
ctcacagagaaacagtggctcagggcaatcgaagacggcaacttggaagaaatggaagag
gaagtccggcttaaaaaacgaaagagacgaagaaatgtggataaggattctgggaaagaa
gatggagaaaaggcaaagaagagaagaggcagacctcctgcagaaaaattgtcacccaac
ccacctaaactgacaaaacagatgaacgccattatcgatactgtgataaactacaaagac
agttcaggacggcagctaagtgaagtcttcattcagctcccatctaggaaagaattacca
gaatattatgagttaattaggaaaccagtggacttcaaaaaaataaaggaaagaattcgt
aaccataagtaccgtagccttggtgacttggagaaagatgtcatgttgctgtgtcacaat
gctcagacattcaacttggagggatcgcagatttatgaggattctattgttctccaatca
gtcttcaagagtgcccgacagaagattgccaaagaggatgagagcgaggatgaaagcaac
gacgatgaggaagatgatgaggaagatgagtcggagtcagaatcaaaatctgtgaaagtg
aaaatcaagctgaataagaaggatgagaaaggccgggacaaagggaaaggcaagaagcga
caaagccgggtaaaagccaagcccgttgtgagcgatgatgacagtgatgaggatcaagat
gaaaatgaccagtcagaagcaagtggaagtgacgatgagtga
DBGET
integrated database retrieval system
