Mauremys reevesii (Reeves's turtle): 120408260
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Entry
120408260 CDS
T07797
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrv03041
]
120408260 (YTHDC2)
Enzymes [BR:
mrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120408260 (YTHDC2)
Spliceosome [BR:
mrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120408260 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
AAA_19
Ank_2
AAA_22
nSTAND3
Ank
ATPase
PhoH
Ank_4
AAA_7
AAA_16
AAA_29
SRP54
T2SSE
AAA_30
AAA_23
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
120408260
NCBI-ProteinID:
XP_039400905
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All DBs
Position
LG6:67824880..67868610
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AA seq
1429 aa
AA seq
DB search
MSRPSSVSPRPPSSALSGGGPAAASGSGSGRARGLKDIRIDEEVKIAVNIALERFRYGDQ
REMEFPSSLTSTERAFIHRLSQSLGLISKSKGKGANRYLTIKKKDGSELAHTVMACSLTP
NTKHAIRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKR
GESEFDSFRQSLPVFEKQEEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDCYKNGIPC
RIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLM
AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDILQKQTALKLILSSAALDVNLFIRYFG
SCPVIHIQGRPYEVKEMFLEDTLRSTGYTNKEMVKYKKEKQREEKQQTTLTEWYSAQDNT
TKPESQRQRSVPSVSEEYDLLDDGGDTVFSQLTEKDVNCLEPWLIKEMDSCLSDIWLHKD
VDAFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLIGMGANVHSKSSNGW
MALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQANGGDLSAEDRELLKAYHHSFDD
EKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFML
HSNMQTSDQKKVLKTPPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALNCVT
MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK
LLAPINCPIADFLMKAPDPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHL
GKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALL
RAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV
NTNSENWAVVKGALVAGMYPNLVHVDRENLVLTGPKEKRVRFHPTSVLSQPQYKKIPPAN
GQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVSLFCGPARLPSNALQEPSSFR
VDGVPNDSSDSEIEDRTTANLAALKLDEWLHFKLDPEAASLLLQLRQKWHSLFLRRMRAP
SKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNSSRKS
SAETEFSDDSSNAEKVLMKSTSPAFHPPQKYKERGILHSKRSSDDRSDQSSVKSTDSSSY
PSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLDISQQKGIWSTTPSNERKLN
RAFWESSMVYLIFSVQGSGHFQGFARMSSEIGREKSQDWGSTGLGGVFKVEWIRKESLPF
QFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWDRIPLGEKNTTD
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcccagcagcgtgtccccccggccgcccagcagcgccctgtccggcgggggc
ccggccgcagcctccggctcgggcagcggccgggccagggggctgaaggacattcgcatc
gacgaggaggtgaagatcgcggtgaacatcgccctggagcggttccgctacggggaccag
agagaaatggaatttccttcttctttgactagtactgaaagagcatttattcaccgactg
agtcagtctcttggtctgatttctaaaagtaaaggaaaaggagcaaacagatatttaacc
ataaagaagaaagatggatcagaattggctcatacagtaatggcctgtagtctgaccccc
aatacaaaacatgctattaggagcctaattcagagatttcctgtgaccaataaagaacgc
actgaacttctaccaaaaacagaacgaggaaatgtgtttgctgttgaagctgagaacaga
gaaatgagtaagacaagtgggcgacttaacaatggcatccctcagattcctgtgaaaagg
ggggaatctgaatttgattccttcaggcaatctctaccagtttttgaaaaacaggaagaa
attgtcagaattattaaagaaaataaagttgttctgattgtgggagaaactggatcagga
aaaactactcagattcctcaattccttcttgatgactgttacaaaaatggaattccatgt
cgcatattttgcactcagccaagacgtttggcagctattgctgtggctgaaagggttgct
gcagaaaggagagaaaagattggccagacaattggctatcagatccgattagaaagcagg
gtttctccaaagacgctgctaacattttgcactaacggtgtattacttcgtacgctgatg
gcaggagacagcacgctatcgaccgtgacgcatgttattgtggatgaagtacatgagagg
gatcgattcagtgacttcttgctaacaaagttaagagacatattgcaaaaacagacagct
ttgaaactgattctttctagtgctgccctggatgtaaatctctttatcagatattttgga
agctgcccagtgatacacattcaaggaagaccatatgaagttaaggagatgtttctggaa
gataccttacgaagtacaggatatacaaataaagagatggtaaaatacaaaaaagaaaaa
cagcgagaagagaaacagcaaaccacccttacagaatggtattctgctcaagacaacact
accaaaccagaatctcaaagacagagatctgtcccaagtgtgtctgaagagtatgacttg
ttggatgatggtggtgacacagtgttcagtcaactgactgaaaaagatgtgaattgcctt
gaaccatggttaataaaagaaatggattcttgtctctccgatatatggttgcataaagat
gttgatgcctttgctcaggtgtttcaccttatcttaactgaaaatgtcagtgttgattac
agacacagtgaaaccagtgcaactgcactaatgattgcttcagggcgaggtttcttaagt
caggtagaacagctgattggaatgggagcaaatgtccacagcaaatcatccaatggctgg
atggctttggattgggctaaacattttggacagactgagattgtagatcttctggaatct
tacagtgcttcattagagtttggaaatctggatgaaagttctctagtgcaggcaaatggt
ggtgatcttagtgcagaagacagagaactattgaaagcttatcatcacagttttgatgat
gaaaaagtggatctggatctgataatgcacctactttacaacatctgtcatagctgtgat
gctggagcagttttaatttttcttcctggatatgatgagatagttggcttaagggatcgc
attctgtttgatgacaagaggtttgctgataatgctcacagatatcaagtttttatgctg
cattcaaatatgcaaacatcagatcagaagaaggtgctaaaaactccacctccgggcatt
cgcaaaataattctttctactaatattgcagaaaccagcatcacagtcaatgatgttgtc
tttgttattgactctggcaagatgaaagagaagtcctttgatgcgctgaactgtgttacc
atgctaaaaatggtgtggatttcaaaagccagtgccatccagagaaaaggcagggctgga
cgctgtcggcctggaatctgtttccgactcttcagcaggctccgatttcagaatatgttg
gaatttcagactccagaacttctaagaatgccactacaggaactttgtttgcacacaaaa
ctgctagcaccaattaactgtccaattgctgactttttgatgaaagccccagatcctcca
ccagccttaattgtgagaaatgctgttcagatgcttaagacaatagatgccatggatacc
tgggaagatctcacggaacttggttatcatctggctgacttacctgtagagccacacctt
ggtaaaatggtgttgtgtgctgttgttttgaagtgcctggatcctattcttactattgct
tgcactcttgcatatcgagacccttttgtcctacctacacaggcctcacaaaaacgtgca
gccatgctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggcgcttctc
agggcattccaggcatggcagaaggcacgaagtgatggctgggagagagccttctgtgag
aagaattttctctctcaagctactatggaaatcattataggaatgagaacacagttgctt
ggtcagctcagagcatcaggttttgttagagccagaggtggaggtgatattcgagatgtt
aacaccaattctgaaaattgggctgtagtgaaaggtgctttagtggctgggatgtatcca
aatctagtgcatgtggatagagagaaccttgtattgactggcccgaaggagaagagagtg
cgatttcatcctacctctgttcttagccagcctcagtataaaaagattcctccagcaaat
ggtcaagctgcagcaattcaagcactccccacagactggcttatatatgatgaaatgact
agagcacacaggatagccaacatcagatgctgttcagctgtgacgcctgtcactgtgtcc
ctcttctgtggtccagctcggttgccaagtaatgctttacaggagccctcatcctttaga
gtggatggtgttcctaatgatagtagtgatagcgagatagaagacagaacaactgctaat
ctggctgcattgaagctagatgaatggctacatttcaaactggatcctgaggctgccagt
ctgctgctgcaactcagacagaaatggcatagtttatttctgcgccgcatgcgagctcct
tctaaaccttggtctcaagttgatgaagcaactataagagcaatcatagctgttttaagt
actgaagagcagtctgcaggcttacagcaaccatcaggaattgggcaaagaccaagacct
atgtcttctgaagaacttcccttagcatcttcttggagatcaaatagcagtaggaaaagc
tcagcagaaacagaattctctgatgactcttctaatgctgaaaaagtcctaatgaaatct
acatctccagcatttcacccaccacagaaatacaaagaaagaggtatcttgcattctaaa
cgaagttcagatgacaggtcagatcagtcatctgtgaaatccacagacagtagtagctat
cccagcccgtgtgccagtccttctcctccatcatctggaaagggatccaagtctccttca
cccagaccaaatatgccaattcggtacttcattatgaagagcagcaacttgagaaacctt
gatatttctcaacaaaaaggtatctggtctacaactccaagtaatgagagaaaactaaat
agagccttttgggaaagcagcatggtttacttgatattttcagttcaaggatcaggacat
tttcagggttttgctagaatgtcttcagagataggacgtgagaaaagtcaagactggggc
tctacaggcttgggaggagtgtttaaggtggagtggatccggaaagaaagtcttcccttt
cagtttgcacaccacttactcaacccttggaatgataataagaaagtacaaataagcaga
gatggccaggaattggaaccacaggttggagaacagctgctacagctttgggatcgtatt
cctttaggagagaaaaacacaactgattga
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integrated database retrieval system
