Mauremys reevesii (Reeves's turtle): 120408324
Help
Entry
120408324 CDS
T07797
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120408324 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120408324 (MSH3)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120408324 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Spectrin_Dys-1
Motif
Other DBs
NCBI-GeneID:
120408324
NCBI-ProteinID:
XP_039401051
LinkDB
All DBs
Position
LG6:48166105..48337794
Genome browser
AA seq
1112 aa
AA seq
DB search
MRRGREPRGPGQSVLSKFFRPVGSLRVAGSSAGSAASGGGDGLQAAAPHTTSKSGRNKRR
AVENNEPSKKRTKPVQTNRKEGHDAVKILDVEEPKKCARPCICVKTLNKLREFCSDSKHP
CNRVQVDTLQGSQSVHLEKCPTFVERNLEMNSALHSQDTGSQVSEKEQSSFSLNQFSASC
KSFEGSQNISNTNLLNKRTKSIYTPLELQFIEMKEQYKDAILCVECGYKYRFFGEDAEIA
AKELNIYCHQDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQMETAALKAAGENKSSLF
TRKLTALYTKSTLIGEDVNPLLKLDDPVDVEELTADVSDNYLLCICENKESLRDKKKGDV
VIGIVAVQPTTGEVVFDSFQDSASRLELESRVLRLQPVELLLPSDLSAQSERLISSITSV
SLRDDRIRIERMESIYFEYSRAFQLMTDFYARGVLDTTGSQQLSIILNLDKPVICSLAAV
IMYLKEFNLEKILYNPSNFKQLSSEAEYMTINGTTLKNLEILQNQTDMKTKGSLLWILDH
TKTSFGRRKLKKWVTQPLMKSSEINARLDAVSEILLSESSVFGHIQNHLCKMPDIERGLC
SIYHKKCSTQEFFLIVSTLSRLETELQALFPAIRSQVKAPLLQMALLEIPELLCPVKHYL
KILNEEAAKTGDKTQLFKDLTDFPTIRKQKDDIQKVISQIQFHLQEIRQMIKNPSAEYVT
VSGQEFLIEVKNSLSSSVPSDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCNAE
WLNILDHFSEYYHSVLKAVSHLATVDCIFSLAKVAKQGAYCRPVVQDKGKKIIIKNGRHP
VIDVLLGEQDQYVPNSTNLSGDKERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAE
ESTVGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSSSLVILDELGRGTSTHD
GIAIAYATLEHFIRDVESLTLFVTHYPSVCDLEKIYPESVGNYHMAFLVNEEESEQQKGS
EDEENPEFITFLYQTTRGVAARSYGLNVAKLADVPEEILKKAAHKSKELEGLVNMKRNRL
KSFARIWNINNSQELQEWSSMCETGDEWIDHF
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgggggcgagagccgcgcggccccggacagtcggtgctgagtaaattcttccgg
ccggtggggtccctgcgcgtagccgggtcctcagccggctccgcggcgagcggcggcggc
gatgggctccaggctgcggctccgcacacgacttctaagtctggcagaaataagagaaga
gctgttgaaaacaatgaacctagtaaaaagaggacaaaaccagtacaaactaatagaaag
gaaggccatgatgcagtgaagattcttgatgttgaagagcctaagaaatgtgccaggccc
tgcatatgtgtgaaaacattaaacaaactgagagaattctgcagtgattcaaagcaccca
tgtaacagagtccaggtggatactttacaagggagtcaatctgtgcacttggaaaaatgt
ccgacttttgtggaaagaaacctggaaatgaacagtgctcttcattctcaggacacaggt
tctcaggtcagtgagaaggaacagtcatcctttagtcttaatcaattttcagcatcatgt
aagagttttgaaggctctcaaaatatttctaatacaaacctccttaataaaagaaccaaa
agcatatacactccactagaactccagttcatagaaatgaaagaacagtataaagatgct
attttgtgcgtggaatgtggatataagtatagattctttggagaagatgcagagattgca
gcaaaggaactaaacatttactgtcatcaggatcacaattttatgacggccagtatacca
actcacagactatttgttcatgtacggcgacttgtagcaaaaggatataaggtgggagtt
gtaaaacaaatggaaactgcagcactgaaggctgctggagaaaataaaagctctctattt
actcgaaaactgactgctctctataccaaatctacacttattggagaagatgtgaacccc
ttgctgaagctagatgatcctgtagatgttgaagaattaacagctgatgtttccgataac
tatcttctttgtatctgtgaaaataaagaaagcttaagagacaagaagaaaggggatgtt
gtcataggcatagtggcagtccaacccactacgggggaagtagtttttgacagttttcag
gactccgcatctcgcttagaattagagagtcgagttttgcgcctgcaaccagttgaatta
ctgcttccatcagacttgtcggctcaatctgagaggctcatcagcagcataacctctgta
agtttacgagatgacagaattcgaatagaaaggatggaaagcatttattttgaatacagc
cgtgctttccagctgatgactgatttttatgcaagaggagtgcttgataccacaggttct
caacaactgtctataatcctaaacttggataagcctgtgatttgctctttggcagcagta
attatgtacctcaaagaatttaatttggaaaagatactttacaacccgagtaactttaaa
cagttatcaagtgaagctgaatacatgacaattaatgggacaacactgaaaaatctggaa
atcttacaaaatcagactgatatgaaaacaaaaggcagcctattgtggatcttggatcat
accaaaacttcctttggacgtcggaaactaaagaaatgggtgacacaacctcttatgaaa
tccagtgaaataaatgcccgacttgatgctgtgtctgaaattctcctgtcagaatccagt
gtgtttggtcatattcaaaatcatctgtgtaagatgccagacatagagagaggactctgt
agtatttatcacaaaaagtgttcaacccaagagttcttcttgatagtcagcactttgtct
cgcctggagacagaactccaagcactgtttccagctatacgttcccaagtgaaagctcct
ctactgcagatggccctcttggaaattcctgagctcctttgccccgtgaaacattactta
aagatacttaatgaagaagcggccaaaactggagataaaacccaattgttcaaggatctt
acagacttccctactatcagaaagcagaaggatgacattcagaaggtgatttcccagatc
caatttcatctgcaagaaatacgacaaatgataaagaacccttctgcagagtatgttaca
gtatcaggacaagagtttctgatagaagtcaagaattcactctcatcctctgtaccctcg
gattgggttaaggttggtagcacaaaagctgtcagccgtttccactctccttttattgta
gaaaattaccgacatctgaatcagctccgggagcagctagtccttgactgcaatgctgaa
tggctaaatattttagatcattttagtgaatattatcactctgtgttgaaggcggttagt
cacctagcaactgttgactgcattttctcattggccaaggttgctaaacaaggagcctat
tgcagaccagttgtgcaagataaagggaaaaaaataattataaaaaatggcagacaccct
gtgattgatgtattgctaggagaacaagatcagtatgttccaaacagcaccaacctatcc
ggtgacaaagaaagggtaatgataattactggacccaacatgggtggaaagagctcctat
ataaaacaagttgcactgatcacgatcatggcacagattggttcctatgttcctgcagag
gagtccacagttggaattgtggatggtatttttaccagaatgggtgctgcagacaacata
tacaagggtcggagtactttcatggaggaactaacagatacagcagagataataagaaaa
gcaacctcaagttcactagtaatattggatgaactggggagaggaactagcacacatgat
ggaattgctattgcctatgctacacttgaacattttatcagagatgtggaatcattgaca
ctgtttgtcactcactacccctcggtatgtgatctagaaaagatctacccagagtcagtt
gggaactaccacatggccttcctggtgaatgaagaggaaagtgaacaacaaaaaggatct
gaagatgaagagaatcctgaatttatcacttttctttatcaaacaactagaggagttgct
gcaaggagttatggactaaatgttgctaaactagcagatgttcctgaagaaatcttaaag
aaggcagctcacaaatcaaaagagcttgagggattagtgaatatgaaaagaaacaggctg
aaatcttttgccagaatatggaatataaataattcccaggaactacaagaatggagtagt
atgtgtgaaactggagatgaatggatagaccatttttaa
DBGET
integrated database retrieval system
