Mauremys reevesii (Reeves's turtle): 120408945
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Entry
120408945 CDS
T07797
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mrv00536
]
120408945 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mrv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120408945 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120408945
NCBI-ProteinID:
XP_039402046
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All DBs
Position
LG7:complement(42103706..42267838)
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AA seq
716 aa
AA seq
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METAILGRVDQLLDEKLKFNLPRHREVRDTHQRCNCPAGPPGPSGRPGLPGDKGAMGIPG
RPGLKGQPGEKGTPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQKGEMGV
AGPKGQPGPPGQKGEKGQCGDYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPG
PPGPPGPTGPSGPAGNPGQPGPVGPPGKAGEPGKAGKDGKGLPGSPGPKGDPGIQGYHGR
KGEVGEAGLPGAPGLPGPIGPKGEKGDTGVKGERGMPGLPGKHGAKGVPGMAAAGMKGET
GVAGMMGPPGLPGKRGQRGEKGRAGDPGLPGFLGQKGEKGDAGNALGGGKGEPGHPGLPG
PPGPKGEAGDIGQTGIAGPQGEKGEPGAPGEQGPVGPRGPKGEPGKDEMVDYDGNINEAL
QEIRTLALMGPPGLPGVAGPPGLPGQKGEIGLPGPPGHDGEKGPRGKSGEVGPPGPQGPP
GKEGPPGMKGETGLTGTPGAKGEKGEAGEAGSPGLDGPTGEKGEQGDQGIPGPSGLPGLI
GLPGLTGEKGEPGEDGEKGDPGDSVSGPPGPQGPPGAAGLQGLPGPKGEAGIDGMKGEKG
VQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGAPGPAGPKGERGSKGDPGNAGPMGLAG
LPGLQGPSGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggagacagctattttgggaagagttgaccaactgcttgatgagaaattaaagttcaac
ttgccgagacatcgagaagttcgagatacccaccagaggtgcaattgcccagcaggacct
cctggcccttcaggaagaccagggcttccgggagacaaaggcgccatgggaatccctgga
agaccgggactaaaggggcaacccggagagaagggaacccctggagaagcaggcatgtcc
atcatcggtccccgaggccctcccggacagcctggaacgagaggttttcctggatttccg
ggcccaattggtttggatggcaaaccgggccatcctggacagaagggggagatgggtgtt
gctggtcccaagggacagccgggacctccaggacaaaaaggagaaaagggccagtgtgga
gactacccacacaggctgttgcctctcctcaattcagtgcggctggctccacccccggtt
ataaagagacgcactttccagggcgaacaaggacaggcggggattcaaggtccgccaggg
ccacctggtccaccagggccaactggaccatctggaccagcaggaaatccaggacaacct
ggcccagttgggccacccggcaaagcaggggagcctggaaaggcaggcaaggatggaaag
ggcttacctggatcccctggaccaaagggagaccctggaattcaaggataccatgggagg
aagggtgaggtgggtgaggctggcctaccaggtgcacctggccttcctggacctattggc
cccaagggtgaaaagggggacactggcgtgaagggagagaggggcatgccagggctgcca
ggaaaacatggagctaagggggttcctggaatggctgctgcagggatgaagggagaaact
ggagttgcagggatgatgggccccccaggtttgccagggaaaaggggacagaggggagag
aagggaagagctggtgatcccggacttcctggattcctaggacagaagggagagaaggga
gatgctggcaatgcactcgggggaggtaaaggggaacccggacacccgggactacctggg
cctccaggaccaaagggggaagctggtgacattggccagactggaattgcaggaccgcag
ggggaaaagggagaacctggagcacccggagaacaggggcctgttggtcccaggggtccc
aaaggggagccaggaaaggatgaaatggtggattatgatggtaacatcaacgaagctcta
caggaaatacgaaccttggccctgatgggacctcctggacttccaggagtagctgggccc
ccagggctaccaggacagaagggtgaaattggtttaccgggtcctcctggacacgatgga
gagaaggggccacgaggtaaatcaggagaagtggggcctcctggtccccaagggccccca
ggaaaggagggacctccaggaatgaagggagagactggacttacagggaccccaggagca
aagggggaaaagggggaggcaggagaagctggctctccgggtcttgatggcccaactggg
gagaaaggagaacaaggtgaccaagggataccaggaccttcaggattaccgggtctaatt
ggacttccaggactgacaggagaaaaaggagaacctggtgaggatggggaaaaaggagac
ccaggggactcagtatcagggccacccgggccccaaggcccaccaggtgctgcaggtctt
caaggccttccaggaccgaagggggaagcagggattgatggaatgaaaggagagaagggt
gtccagggtgagaaaggagaccgaggtccactgggattgcccggtgcttcaggtttagac
ggcaggcctggaccaccgggtactccaggaccaattggagctccaggaccagcaggacca
aaaggggaaaggggcagtaaaggtgaccctggaaatgcaggaccaatggggctagctggg
cttcctggtttacaaggcccatctggtgacaaaggaaaccggggggagaggggcaagaaa
ggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcaccc
tgtccattgggggaagatggcttgccagttcagggctgctggaataagtga
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