Mauremys reevesii (Reeves's turtle): 120409111
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Entry
120409111 CDS
T07797
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04010
MAPK signaling pathway
mrv04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120409111 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120409111 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrv03000
]
120409111 (NFKB2)
Transcription factors [BR:
mrv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120409111 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120409111
NCBI-ProteinID:
XP_039402494
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All DBs
Position
LG7:70002943..70029039
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AA seq
1008 aa
AA seq
DB search
MLHCSAPSSAAAPLGGPRTPEREWGRGRGGPARLVPWRRRRAPESPGGGGRDGTFLGQLE
RGAAEAGGPGPGPAVQPGSAMDEPYNACLDGIDYDDFHFSSHMMEQKEPLMETAEGPYLI
IIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYGGVARIEVDLVTHSDP
PRVHAHSLVGKQCNEAGNCIVTVGPKDMTAQFNNLGVLHVTKKNMMEIMKDKLKQQKIRN
RNQALTESELREIEVEAKELKKVMDLSIVRLRFTAYLRDSNGNFTLPLNPVISDPIHDSK
SPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDV
HKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERKRKK
VLPQFPQHFGGGSHMGGAGGGSSGFGSGGGGNLNYPYSSGLTYNNIYSSGPHPVGGYQGG
VQMTRATNMEEEGDGKHLPGETGKQPSPPEESHRQELHYHAQLCSMRMLALAQRSAHALL
NYSVTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTTVIEQLIQVVLSIPNQQIINV
ANHLQQTPLHLAVITKQHQVVGLLLQAHADPTLLDRYGNSLLHLALQTGDEAMLRTLLGH
LGSATPCLLSTPNYHGLLPVHLAVRVKSLACLDLLVRMGADVNAMERQGGRTPLHLAVEM
ENLNVAGHLVKKLGADVNARTFAGNTPLHLAAGLGSPILTKMLIKAGGDVLCENDEPVRS
SSSEASSDMDSGPEDQEAGMELGESDTEHTDTSSAAEHRSREPGTRGTKQRRRHTPLDLT
RSHKVREILLRASLQGPESEQPAAPRPGTILSLDSNTLQGLEQLLNQDRSGSDWTELAQR
LGLRSLVETYKDTASPSGSLLLSYELAGGSLGGLLEALDSMGLSEGVRMLRKAETADKLQ
STELKEDSAYGSQSVEEEQPPAPPLKLHPLPSAELLGEPPHSQQQQVH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactgctcggcccccagctcagctgcagccccgctcgggggcccgcgcaccccg
gaacgcgagtgggggcggggaaggggaggccccgcccggctggtcccgtggcgcaggagg
cgggctccggaatccccaggaggcgggggcagagacgggactttcctgggtcagctggaa
cgaggagcggctgaagccggagggcccggcccaggccccgcagtgcagcccggctccgcc
atggacgagccctacaacgcgtgcctggatgggatcgactatgatgacttccatttcagc
tcccacatgatggagcagaaggagccgctgatggagacggccgaaggtccgtatctcatc
atcatcgagcagccaaaacagcgcgggttccggttccggtacggctgtgaaggcccctca
catggtgggctgcctggagcatccagcgagaagggacgcaagacttaccccactgtcaag
atctgcaactacggaggtgtggcgcggatcgaggtagacttggtgacccacagtgaccct
ccgcgagtgcatgctcacagcctggtggggaagcagtgcaacgaggctggcaattgcatc
gtgaccgtgggacctaaggacatgacggcacaattcaacaaccttggggtgctccacgtg
accaagaagaacatgatggagatcatgaaggacaagttgaagcagcagaagatacgcaat
agaaatcaggcgctgacagagtctgagctgcgggagattgaggtggaggcaaaggagttg
aagaaggtgatggacctgagcattgtgcgcctccgtttcaccgcctacctccgtgacagc
aacgggaacttcacactgcccctgaaccctgtcatctctgacccgatccatgacagcaag
tcacctggggcttccaacctgaagatctcccggatggataagacagctggctcggtgcgg
ggaggggacgaggtctacttgctgtgcgataaagttcagaaagatgacattgaggtgcgg
ttctacgaggatgatgagaatggctggcaggccttcggggacttctcccctacggatgtt
cacaagcagtatgccatcgtcttccgcactccgccctaccacaagcccaagatcgaccgc
cccgtcactgtcttcttgcagctgaagcggaaacgtgggggggacgtgagcgactccaag
cagtttacctactatccagtggtggaagataaggaggaggtggagaggaagcggaagaag
gtgctgcctcagttcccccagcactttggtgggggctcgcacatgggaggggccggcggg
ggaagcagtggctttggctctggcggaggcgggaatctaaactatccatactcctcgggg
ctgacttacaacaacatctactcgtctggcccccaccccgtgggcggctaccaagggggg
gtgcagatgaccagggccaccaacatggaagaggagggggatggcaagcacctgcctggg
gagactgggaagcagcccagtccgccagaggagagccaccgtcaggagttgcattaccac
gcccagctctgcagcatgaggatgctggctctggctcagcgcagcgcccatgccctgctg
aactactcggtcactgctgacccacgcatgctgctggccgtgcagcggcacctggccgca
tcccaggatgagaacggagacacgcctttgcatctcgccatcatccacgagcagacgact
gtgattgagcagctgatccaggttgtcctcagcatccccaaccagcagatcatcaatgtg
gccaaccacttgcagcagactcccttgcacctggcagtgatcaccaagcagcaccaggtg
gtggggttactgctgcaggcccatgcggaccccacgctgctggatcgctatggcaactca
ctgctgcacctggcgctccagacgggtgacgaggccatgctgaggacgctgctggggcac
ctgggctccgccaccccctgtctgctcagcacacccaattaccatggcctactccccgtg
cacctggctgtgagggtgaagagcctggcctgcctggacctgctggtgaggatgggagcg
gatgtgaatgccatggagcggcagggcggccggacgcctctgcacctggccgtggagatg
gagaacctcaacgtggccggccacctggtgaagaagctgggagctgatgtcaatgctcgg
acgtttgctggaaacacccctctgcacctggctgcaggcctgggctcccccatcctcacc
aaaatgctcatcaaagcaggaggggacgtcctctgtgagaacgatgagccggtgaggtcg
tcctcgtctgaagccagcagcgacatggacagtgggcctgaggatcaggaggcaggcatg
gagctgggagagtcagatacagagcacacagataccagtagcgctgctgagcacagaagc
agggagcctggcacccggggtacaaagcagcgccggagacacacaccgcttgacttaacc
aggagccacaaggtgcgggagatcttgctgcgtgcctcgctgcagggcccagagtcggag
cagcctgctgcccccaggccagggaccatcctgtcactcgacagcaacaccctgcagggc
ctggagcagttactgaatcaggaccgcagcggctcagactggactgagctggcccagaga
ctcggcctgcgcagcctagtggagacgtacaaggacacggcctcccccagcgggagcctc
ctgctcagttacgagctcgctggtggcagcctggggggcttgctggaggcactggactcc
atggggctcagcgagggagtgaggatgcttcgcaaagcggagacagccgacaagctgcaa
agcacagagctcaaggaggacagtgcctatgggagccagtcggtggaagaggagcagccg
ccagccccaccgctgaagctgcacccgctgccctctgcagagctgctgggagagcccccc
cacagccagcagcagcaggtgcactga
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