Mauremys reevesii (Reeves's turtle): 120409159
Help
Entry
120409159 CDS
T07797
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120409159 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120409159 (EXOSC1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120409159 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120409159 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Bunya_nucleocap
Motif
Other DBs
NCBI-GeneID:
120409159
NCBI-ProteinID:
XP_039402661
LinkDB
All DBs
Position
LG7
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPVRCCVPGERLCSLEEGAAGSGTYTRHGYVCAALAGCLAKTSEDGALPVVSVVRDAE
SQLLPDVGAIVTCKVCSINSRFAKVRILYIGSTPLKSAFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDIQSNYLLSTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHSK
ELRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccggtgcggtgctgcgtcccaggtgagcggctctgcagcctggaggagggc
gcggcgggcagcgggacctacacccggcacggctacgtgtgcgcggcgctggccggctgc
ctggcgaagacgagcgaggacggagcgctgccggtggtgtctgtggtgagagatgccgag
tcccagctcctgcccgacgtaggggccatcgtgacgtgcaaggtgtgcagcattaactcc
cgcttcgccaaggtgcgcatcctgtacatcggctccacaccgctgaaatccgctttccga
ggcaccatacggagagaagacattcgagccacagagaaagacaaggtggaagtttacaag
agtttccgtcctggggacatagtcctggccaaagtgatctccctgggggacatacagtcc
aactacctgctgagcacagcggagaacgagctgggcgtggtggtggctcacagcgaagca
ggggcacagatggtgccgatcagctggtgtgagatgcagtgccccaggacacactccaag
gagctccgcaaggtggcccgcgtgcagccagaattcctgcagacctag
DBGET
integrated database retrieval system
