Mauremys reevesii (Reeves's turtle): 120409237
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Entry
120409237 CDS
T07797
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120409237 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrv04121
]
120409237 (HERC4)
Enzymes [BR:
mrv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120409237 (HERC4)
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
HECT type E3
120409237 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
DUF3085
Motif
Other DBs
NCBI-GeneID:
120409237
NCBI-ProteinID:
XP_039402879
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Position
LG7:43691631..43780649
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AA seq
1049 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKKVRDVGCGLRHTVFALDDGTVYTCGC
NDLGQLGHEKSRKRPEHVGALDAQNIVSVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECIRIPRNIKSLSDIQIMQVACGYCHSLALSKGSEVYSWGQNKYGQLGIGYEFKKQTS
PQLIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWIPYSGQCPPSTDSEE
YYCVKRIFSGGDQSFSHYFNPQNMMPPDDFRCSDSSKQIWTVNEVFIQKLLTCPSGRLPV
EIADEIDGTFSSAGCLNGSFLAVSNDDHYRTSARFSGVDMNAARLLFHKLISPDHPRISQ
QVAASLEKNLIPKLTTSLPDVEALRLYLTLPECPLMSDVNNFTTLAIPFGTAVVNLEKAP
LKVLENWWSILEPPLFLKIVELYKDVVVHLLKLYKIGIPNSERRIFTSFLHTSLKVLEIL
HRVNERGGQIIQYDKFYIHEIQDLIDIRNDYINWIQQQAYGMLTDNPVTICTYPFVFDAQ
AKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLPVFESVNPCLILVVRRDNIVGDAMEVLRK
TKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKT
FEDSDLFHLIGVVCGLAIYNFTIVDLQFPLALYKKLLNKKPSLDDLKELMPDVGRSMQQL
LDYPEDDIEETFCLNFTITVENFGTTEVKELIPKGADIPVVKQNRQEFVDAYVDYIFSKS
VASLFDAFHAGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGEYWADHPT
IKIFWDVFHELPLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEGYLPVSHTCFNL
LDLPKYTDKETLKSKLIQAIDHNEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcctttggacagcttggattgggtggaattgatgaagag
attgtattagaacccagaaaaagtgactttttcctaaataaaaaggtccgagatgtagga
tgtggactcagacacactgtttttgccctggatgatgggactgtgtatacatgtggatgt
aatgatctaggacaattagggcatgaaaaatccagaaagagaccagagcatgttggtgcc
ctggatgcccaaaatattgtgtctgtttcatgtggagaagcccacacactagcattaaat
gacaagggccaagtgtatgcttggggtcttgctactgatggacagcttggcttgcctgga
acagaggaatgtatcagaatacccagaaatatcaaaagcttatcagatatccaaataatg
caagttgcctgtggctactgtcactcacttgcactctcaaaaggaagtgaagtttattcc
tggggacaaaataaatatggccaactgggtataggttatgaatttaaaaagcagacttca
cctcaactgattaaatctttactgggaatcccttttgcacaaattgcagcaggaggagca
catagttttgtattaactctttctggagccatttttggatggggacgcaacaaatttggt
caacttggtcttaatgatgaaaatgacaggtatgttcctaatctgctgaagtccctaaga
tctcagaaaattattcacatctgttgtggagaagatcatacagctgctcttacaaaggaa
ggtggggtttttacatttggagctggaggctatggacaattgggtcataactctaccagc
catgagataaacccaaggaaagtttttgaacttatgggaagtattgtcacacagattgct
tgtgggaggcagcacacctctgcatttgttccttcatctggaagaatttactcctttggt
cttggaggtaatggacagttaggaacaggatcaaccagtaataggaaaagtcctttcaca
gtaaaaggaaactggattccttatagtggacagtgcccaccaagcacagacagtgaagaa
tattattgtgtaaagagaattttctctggtggagatcagagtttttcacactactttaat
ccacagaacatgatgccaccagatgacttcaggtgttctgactcttcaaagcagatctgg
actgtgaatgaagtatttattcagaaattgctgacttgtccatctggaagacttcctgtg
gagatagctgatgaaatagatggaacattttcttcagctggctgcctaaatgggagtttt
ttagctgtcagcaatgatgatcactatagaactagtgctcgattctcgggggttgatatg
aacgctgctagactactatttcacaaacttataagtcctgaccatcctcgtatatcacaa
caggttgcagctagtttggagaagaaccttattcctaaattgactacttccttacctgat
gttgaagccctaaggctgtatctcactctgccagaatgcccactgatgagtgatgtgaac
aattttacaacattagctattccttttgggacagctgttgtaaatctagaaaaagctcca
ctgaaagtacttgaaaactggtggtctatacttgaacctccattgttcctcaagatagtg
gagctgtacaaggatgttgtggtccacctcctgaaattatacaagattggtatccccaat
tctgaaagaagaatctttaccagttttctacacacttctctcaaagttctggaaatttta
catagggtaaatgagagaggaggacaaattatacagtatgacaaattttacattcatgaa
atacaagacttgatagacatcagaaatgactacatcaactggatccagcagcaggcatat
ggaatgctaacagacaatccagttacaatttgcacataccctttcgtgttcgatgcacag
gcaaaaactacgctcttgcaaacagatgctgtcttacaaatgcagatggctgttgaccag
gctcacagacagaatttctcatctatttttctccctgtatttgaatctgtcaatccttgt
ctaatattagtggtgcgcagagacaatattgtaggagatgctatggaagtcctaaggaaa
acgaagaatgtagattacaagaaaccactcaaggttattttcgtaggggaagaagctgtt
gatgcaggaggtgttcgcaaagaatttttcttgctcatcatgagagagttgcttgatccc
aaatatggaatgtttaggtactatgaagagtccaggctcatctggttctctgacaagacc
tttgaagacagtgacttgttccatttgattggtgttgtctgtgggctagcaatatataat
tttactattgtagaccttcagttccccttggctttgtacaagaagctgttgaataagaag
ccttccctagatgacttaaaagagttaatgcctgatgttggcagaagtatgcagcagtta
ctggactatccagaagatgacatagaggagacattttgtctcaactttacaatcactgtg
gaaaattttggcacaacagaagtaaaagagctgattcctaaaggtgccgacattcctgtg
gtcaaacaaaataggcaagaatttgtagatgcctatgtggattacatcttcagtaaatca
gtggcttccttatttgatgcattccatgcaggctttcataaggtgtgtggtggtaaagtt
cttcagctcttccagcccagtgagctgcaggcgatggtgattgggaacacaaattatgat
tggaaagaactggagaagaatacagaatataaaggagaatattgggcagaccatcctaca
attaaaatattttgggatgtttttcacgagttaccactggaaaagaaaaagcagtttctg
ttgtttttaacaggcagtgatcgtattcctattcttggaatgaagtgtcttaaactagtc
atccagccaacaggaggtggagaagggtatcttccagtatctcacacttgctttaatctt
cttgatcttccaaaatacacagacaaagaaaccctaaaatctaagctgatccaggcaata
gatcacaatgaaggcttcagtttagtataa
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