Mauremys reevesii (Reeves's turtle): 120409259
Help
Entry
120409259 CDS
T07797
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrv01002
]
120409259 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrv04121
]
120409259 (USP4)
Enzymes [BR:
mrv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120409259 (USP4)
Peptidases and inhibitors [BR:
mrv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120409259 (USP4)
Ubiquitin system [BR:
mrv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120409259 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Choline_bind_1
Choline_bind_3
Motif
Other DBs
NCBI-GeneID:
120409259
NCBI-ProteinID:
XP_039402938
LinkDB
All DBs
Position
LG7:complement(74240998..74388765)
Genome browser
AA seq
1019 aa
AA seq
DB search
MLSASQAARSVKQPVPRVSWPRAGPASRRGAALPGAPGARAASGGTEEGSAPAHVGWWAR
PDIRCRARGIGCTDMAVELDRGPRPDVGAQRAELGPLLGTALRPGESWYLIDSRWFKQWK
KYVGFDSWDMYNVGEPNLFPGPIDNSGLFADPEIQTLKEHLIDELDYVLVPTEAWNKLVN
WYGCIEGQQPIVRKVVEFGLFVKHCKVEVYLLELKLCENSDPTNVLTCHFSKADTIATIE
KEMQQLFNIPCEKETRLWSRYMSNAYEQVNNLDSTVQDAGLYHGQVLLIEVKNEDGTWPR
QSLPAKSSTATSRNFTSTSESSVNSYSSMSVSSAFANGDSNNSYGLTSSSLGRGVSGFSY
NSYSCRESPSLSQPGICGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINHDNPL
GMRGEIAEAYAELIKQMWSGRHSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL
HEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCS
KVSVTFDPFCYLTLPLPLKKDRSMDVSLVFADLHHRPTQYRVVVPMMGAVSDLCEALSKL
SKIPAENMVVTDVYNHRFHKIFQMDEGLSHIMPKDNIFVYEVCKSSEDGAECITLSVYFR
EKRIRQSSTSSGTVLCGQPLLISVPKHKLTLDHLYDLVLEQIGHYVKFPLTKEYSSVRLD
SGICNGSSGGCEVEEMEHQDGGEEGREKASETDSCQSEGCAHDLLGKEWQHHKKHLFTFS
LVNSYGTSEINSITTEGKLLKLNSYATLAIDLDPDTRKLLFDEQESQAFEKDESMLQSQK
KKTTVALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYN
RYWRDKLDTVVEFPIRDLSMSEFVCDPAADPYVYDLIAVSNHYGAMGVGHYTAYAKNKVN
GKWYYFDDSSVSMASEDQIVTKAAYVLFYQRRDSKQHVAPSLPAESELASEECDGMDTN
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtgccagccaagccgcacgttctgtcaagcagccagtcccccgggtttcctgg
ccgcgcgcggggcccgcctcccgcaggggggctgcactgccaggggcgcctggagcccgg
gcagctagcggcgggacggaggaaggcagtgcgcctgcgcacgttggctggtgggccagg
ccggatatccgctgcagggcgaggggcatcgggtgcacagacatggcggtggagttagac
cgtggcccgaggccggatgtcggggcccagcgggcagagctggggccgctgctagggaca
gcgctgaggccgggcgagtcctggtatttgattgacagtcggtggttcaaacagtggaag
aagtatgtgggttttgacagctgggacatgtacaacgtgggtgagcctaacctgtttcct
ggacccattgataactctggactctttgcagatccagaaatacagaccttaaaagaacat
ctcattgatgagctggattatgtgttggttcccactgaagcctggaataagctagtgaac
tggtatggctgtatagaggggcagcaacctattgtaagaaaagtggtggagttcggtctg
tttgtgaagcactgtaaagtagaagtttatctcctcgaactgaagctgtgtgaaaatagt
gatcctaccaatgtgttgacctgtcatttcagcaaagcagacaccattgccaccattgag
aaggaaatgcaacagctgtttaatatcccctgtgagaaggaaactaggttatggagcagg
tatatgagtaacgcctatgagcaggtcaataatctggacagcactgtacaagatgcaggg
ctctatcacggtcaggtgctgttaatagaagtgaagaatgaagatggtacatggcctagg
cagtctcttccggcaaaatcaagcactgcaactagcagaaattttactagtacttcagaa
tcatcagtaaattcttattcctcaatgtctgtctcttctgcctttgcaaatggtgatagc
aataactcctatggactgaccagctccagccttggcaggggagtctctggcttctcctac
aactcctacagctgcagggagtccccttccctgtcacagcccggcatctgtgggctcagt
aacttgggaaacacctgcttcatgaactctgcattacagtgtttgagtaacaccccacct
ctgactgagtatttcctggaagatagatatgaggctgaaataaatcacgacaatcctctg
gggatgagaggagaaattgcagaagcatatgcagagcttattaagcagatgtggtctggg
agacactctcacgtggcacctcgtatgttcaaaacccaggttggccgttttgcccctcag
ttctcagggtaccagcagcaagattctcaggagctcttggcattcctcctggatggcttg
cacgaggatctgaaccgagtgaagaagaagccctacttggagctcaaggatgccaatggc
aggcctgattcggtggtggcgaaagaagcctgggagaaccatagattaagaaatgactct
atcatcgtggatatttttcatggccttttcaaatccaccctggtctgtccaaaatgctct
aaagtttctgtgacttttgaccctttctgctatttaactcttccattgcccttgaagaaa
gatcgttccatggacgtttctctggtttttgcagacctgcatcatagacctacccagtat
cgggtagttgtgccaatgatgggggctgtatcagacctgtgtgaagctctttccaaactt
tccaagatccctgcagaaaatatggtggtgacagatgtttataatcaccgattccacaaa
attttccaaatggatgaagggttaagtcacatcatgccaaaagacaacatctttgtatat
gaagtttgcaagtcaagcgaggatggcgctgagtgcatcactctctctgtatacttcaga
gaaaagagaataagacagtccagcacttcttcggggactgttctttgtgggcagccactg
ctaatctctgtgccaaaacacaagctcactctggatcacttgtacgatcttgtcttggag
cagattggccactacgttaaattccctctgacaaaagaatattctagtgtacgcctggac
agtgggatctgcaatggctccagtggtggctgcgaagttgaagagatggaacatcaggat
ggaggtgaggagggcagggaaaaagcctcagaaacagattcctgccagtcagagggctgt
gcacatgatttgctggggaaggaatggcagcatcacaagaagcatctgttcacctttagc
cttgtgaattcctatgggacctctgagataaattcaattacaacagaggggaaacttcta
aaactgaactcctatgccacccttgctattgacttggatccagacactcggaagctgctg
tttgatgaacaagagtcacaggcatttgaaaaggatgaaagtatgttacagtcacagaag
aagaaaactactgtcgctcttaaagactgtatagaactctttactacaatggaaacgctt
ggtgaacatgacccttggtactgccctaactgcaagaagcatcagcaggccacaaagaag
tttgatctatggtctttgcccaggattttggtggtgcatttaaaacgcttctcgtacaac
agatactggagggataaacttgacactgtggttgaattccccatcagggatttgagcatg
tctgagtttgtctgtgacccagcagctgatccgtatgtgtatgacctcattgcagtgtcc
aatcactatggagctatgggagtaggccactatactgcatatgcaaagaacaaagtgaat
ggcaaatggtactactttgatgacagcagtgtatcaatggcttctgaagatcaaatagtg
acaaaagccgcatatgtgctattctatcagcggcgggatagcaagcagcacgtagccccg
tctctgcctgcagaaagtgagctggcatcggaagagtgtgacggcatggataccaactga
DBGET
integrated database retrieval system
