Mauremys reevesii (Reeves's turtle): 120409268
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Entry
120409268 CDS
T07797
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03008
Ribosome biogenesis in eukaryotes
mrv03013
Nucleocytoplasmic transport
mrv03015
mRNA surveillance pathway
mrv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120409268 (NXF1)
03015 mRNA surveillance pathway
120409268 (NXF1)
03008 Ribosome biogenesis in eukaryotes
120409268 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120409268 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120409268 (NXF1)
03009 Ribosome biogenesis [BR:
mrv03009
]
120409268 (NXF1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120409268 (NXF1)
mRNA cycle factors
Stress granule specific factors
120409268 (NXF1)
Ribosome biogenesis [BR:
mrv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120409268 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_9
Luteo_coat
UBA_4
Motif
Other DBs
NCBI-GeneID:
120409268
NCBI-ProteinID:
XP_039402960
LinkDB
All DBs
Position
LG7:93456819..93466776
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AA seq
633 aa
AA seq
DB search
MAEEGKGGYSEHDDRVGGAGGGGGFAGRRRKGRGPFRGKMYSEGNHRSWNRGVAGPSPSG
QLEEGDGDVPMSDAHDSLRTRYTPYGSRLNRRGDDWHNRGRGGATNIHVTVKRDLTPQDR
SGSASRSSCRRRWYKVTIPYGKKYDKSWLLSSLQNLSSVPFTPVEFHYDQSRAYFYIEDM
ATANALKQLSRKITDRDNYKVVLIVNHSSPPQSVQKELKPEEIEQLKLTMSKRYDGSQQA
LDLKSLRTDPDLVAQNIDVVLNRRNCMQAVLQIIEENIPELLSLNLTSNKLYQLDDLAEL
AQKATNLKILNLTRNELKSECELDKVKGLKLEELWLDGNPLCNNFRDQSSYVSSIRLRFP
KLLRLDGHELPPPIVFDVETPTTLPPCKGSYFGSDDLKVLVLRFLQQYYSVYDSGDRQGL
LDAYHDGACCSLSIPFLSQNPSRSILSEYFKGSRNVKKLKDPSLRFKLLKHTRLNVVAFL
NELPKTQHDVNSFVVDVCAQTNTLLCFAVHGVFKEVDGKSRDMVRGFTRMFIAVPAGITG
LCIVNDQLFVRKANTEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQAFAMQSGMNVEWSQ
KCLQDNDWDYSQAAQVFTQLKTEGKIPDVAFLK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagggaaaggggggtacagcgaacatgatgaccgtgtgggcggtgcaggt
ggcggtgggggcttcgctgggaggaggaggaaaggtcggggtccgttccgaggcaagatg
tacagtgaggggaaccaccgctcgtggaaccggggtgtagcaggtcccagcccttctggt
cagctggaggagggcgacggagatgttcccatgagcgacgcccatgacagtcttcgaacc
agatacactccctatgggtcacggctgaacaggcgaggcgatgactggcacaaccggggc
cggggaggtgccaccaacatccatgtcacagtgaaacgagacctcaccccccaggaccgg
agtggcagtgccagccgcagcagctgtcggaggaggtggtacaaggtcacaattccctat
ggaaagaagtatgacaagtcatggcttctgagctccctccagaacttgtctagtgtccct
tttactccagtggagttccactacgaccaaagccgggcctacttctatattgaggatatg
gcaacagccaatgcgctcaagcagctgtcccgcaagatcacagatcgagacaattacaag
gtggtgctaattgtcaaccactcatctccaccccagtctgtccagaaggagctgaagccg
gaggaaattgagcagctgaagctcaccatgagtaagagatatgacgggtcccagcaggcc
ctggacctgaagagccttcgcacggacccagacctggtggcacagaacattgatgtggtg
ctgaaccggcggaactgcatgcaggccgtgctgcagatcattgaagagaacatcccggag
ctgctctcactgaatctcaccagcaacaagctgtaccagctggatgacctggcggagctg
gcccagaaagccaccaatctcaagatcctcaatctgacccgcaatgagctgaagtctgag
tgcgagctggacaaggtgaaggggctcaagctggaggagttgtggttggatggaaaccct
ctgtgcaacaatttccgggaccagtccagctatgtcagctccatccgactgcggttcccg
aagcttctgcgcctggacggccacgaactcccccctcctattgtctttgatgtggaaacg
cccaccaccctccccccctgcaagggcagctactttggctcggatgacctgaaggtgctg
gtgcttcgcttcctgcagcagtattactctgtatatgattctggtgacaggcaggggctg
ctggatgcctaccacgatggggcctgctgttccctcagcatccctttcctctcccagaac
ccctccaggagcatcctgagtgaatacttcaagggcagcagaaatgtgaagaaactcaag
gaccctagcctgcgcttcaaattgctcaagcatacgaggctgaatgtggtggccttcctc
aacgagctccccaagacccagcatgatgttaactcctttgtggtggatgtttgtgctcag
acgaataccctgctgtgctttgctgtccatggggtcttcaaggaagtggatggcaagtcc
cgggatatggtgagaggcttcacccgcatgttcattgctgtgccagctggcatcacaggg
ctgtgcatcgtgaatgaccagctgtttgtgcgcaaagcgaacacggaggagatccgcaag
gccttcgtgatgccagcacccacgccctcgtccagccccgtgcccacgctgtcggccgag
cagcaggaaatgctacaggccttcgccatgcagtctggcatgaacgttgagtggtcccaa
aagtgcctccaggacaacgactgggactacagccaggcagcccaggttttcacccagctc
aagacggaggggaagatcccagacgtggcatttctcaagtga
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