Mauremys reevesii (Reeves's turtle): 120409473
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Entry
120409473 CDS
T07797
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrv04121
]
120409473 (ZSWIM8)
Ubiquitin system [BR:
mrv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120409473 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
120409473
NCBI-ProteinID:
XP_039403545
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All DBs
Position
LG7:complement(71840946..71974628)
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AA seq
1820 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAVQQRNCRLQCVETTCEAGRGHGQEPGGTCLQPGDRSRPS
SQEPAVRPKELIGKRKVVSEAPQRALRRLSAEGDKAVYKTAVGKAKLPVGKSLASKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDTFEDDGGVYFSEG
PEPSVRSNPAAKKAPKDPVEEVGSGDDDLPSADENGASRKPEVGENGAAGGGEEGEEEDD
YQVYYLNPQEVAKEEEDKAEGGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGYSNE
ACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLSERL
EYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGTNEMNTIRGRAEE
LREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAA
LGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQT
LSSFYSSSKPTVANQKSPSKHAAQSTTAIQQLPGTSVTQQAGVTTAVQSSPSESFVEKSA
QESSQRSPCEPPGESSVVKQEGKVPSRLALGSRGGYNGRCWGSPVRQKKKHTGMASIDSS
APETTSDSSPTLSRRPLRGGWAATSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARA
KTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGG
HQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVEC
WDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDN
LMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGARAG
SEAVRGLTDSRVTAEPTTVTVAAAVTAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGL
HPYTTLQTHIPCNPQYIGHPIQHMPRPAVFPVPGSAYPQGIHPAFIGAQYPYSVTTPSLA
ATAVSFPGVPVPSMTQIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGAPLTALSSQP
NSLVTGGFPSEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT
EDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTPAF
HQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKR
SKQTKELWQRVSLEMTTFSP
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggggaaaggttttcgtttgaagactctgac
cgctttgaggaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcagctggacccaattcccccactgtcaaaatgaaagat
ggtttggtgattccactggtggaactctctgcgaagcaggtggcatttcacattccattc
gaggtagtggagaaagtctacccccccgtacctgaacagctgcagcttcggatcgccttc
tggagcttcccagagaacgaggaggacatcaggttgtactcctgcctggcgaatggcagt
gcagatgagttccagcggggggagcagctgttccggatgcgagctgtcaaagaccctctt
cagataggtttccacctgagtgccactgtggtacctccgcagatggtgccaccaaaaggt
gcatacaacgtggcagtgatgtttgatcgatgcaggatcacctcatgcagctgtacctgt
ggagctggggccaagtggtgtgcccatgtcgtggccctctgtctcttccggatacacaat
gcatctgcagtatgcttgcgagcacctgtttcagagtccttgtctcggctgcagagagat
cagctacagaaatttgctcagtacctgatcagtgaactcccacaacagattcttcctact
gctcagcgcctactggatgagctgttatcgtctcaatccactgccatcaacacagtgtgt
ggagccccagatcccactgctggtccctcagcctcagaccaaagcacctggtacctggat
gaatctactttaagtgacaacataaagaaaacccttcacaaattctgtgggccctctcct
gttgtcttcagtgatgtgaactctatgtacctctcctccacggagccaccagccgctgcc
gagtgggcatgtctcctgcgtcccctgagagggagagagcctgaggggatctggaacctg
ctctctattgttcgggagatgttcaagagaagagacagcaatgcagcccctctgctggag
atcctgactgaccagtgtctgacctatgagcagataacgggttggtggtacagcgtgcga
acatctgcgtcccacagcagcgctagcgggcacaccggccgcagtaatggtcagtcagaa
gtggctgcccatgcctgtgccagcatgtgtgatgagatggtggttctctggaggctggct
gtcctagacccaaccatcagcccacagaggcgcagggacctttgcacccagctcagacag
tggcagctgaaagtcatagacaatgtcaagagggggcagcacaagaaatccctggagaag
ctcttccaaggtttcaagccagctgtggaagcctgttacttcaactgggaggaggcctat
cccatccctggcatcacctacagcagcactgataagaagaattcgttctgttgggtaaag
gctgtccagcagaggaactgtcggttgcagtgtgtggaaaccacgtgtgaggctggcaga
ggccatgggcaggaacctgggggaacctgtctgcagccaggggacaggtcacgcccctct
tcgcaagagccagctgtccgtcctaaggaactcattgggaagcggaaagttgtctctgaa
gccccccagagggctctgcgccgactttcagcggaaggagataaggctgtttataagaca
gcagtaggcaaggccaagctgccggtggggaaaagcttagccagtaaacatagtgggaaa
cgccgcatgagcagtgaagacagctctctggaaccagacttggcagagatgagcctggat
gacagcagcttggctctgggggcggaggccagtaacaccttcagtttcacggagagcccc
ctgagtaggagctacagggacacttttgaagatgacggtggcgtgtacttctcggagggt
cctgagcccagcgtcaggagcaatcccgctgccaagaaagctccaaaggatcccgtggaa
gaagtgggcagcggagatgacgatctgccttctgcagatgagaacggtgcaagccggaag
ccagaagtgggagaaaatggtgcagcagggggcggggaggagggagaagaggaagatgat
taccaggtatactatctgaatccacaggaggtggccaaggaggaggaggacaaagcagag
ggggggaatgaagaggagcaggacatctttgctggtataaagcccctggagcaggagaac
aggatggagatcctctttgcctgtgcagaggctctctatgcacacggatacagtaatgaa
gcatgccgtctgactgtagaactggccagggacctactggccaaccctccagatctcaag
gtggagcagcccccaaccaaggggaagaagaacaaggtgtcgaccagcaagcagacgtgg
atggcaaccaacaccctgtccaaagctgctttcctgctgactgtgctgagtgagaggctg
gaataccacaacttggccttccgcattggcatgtttgccttggagctacagaggcctcct
gcctctaccaaggccctggaggtgaagctggcataccaggaatctgagattgtggccttg
ttaaagaagatccctttgggcactaatgagatgaacaccattcgaggaagggctgaagag
ctgagagaagggaccttgtgtgattatcgccctgtcctgcctctcatgctggccagcttc
atatttgatgtcctatgcactccagtggtttctccgacagggtccaggcccccaagccgt
aattggaataatgaaatgcctggcgatgaggaacttggttttgaagcagctgttgctgct
cttggcatgaagacgactgtgagtgaagcagagcaccctcttctgtgcgaaggaacccga
agagagaagggtgatctggctctagctctgatgatcacatacaaagatgaccagtctaaa
ctgaaaaagattttagacaaactgctagacagagagagccaaacacacaagccacagact
ctgagttccttctactcatccagcaagcccacagtagccaatcagaaatctccttccaaa
catgctgcccaatccaccacagctatccagcagcttccagggacgtcagtcactcagcaa
gcaggtgtaaccactgcagtccagagcagtccttctgaaagctttgtggagaagagtgca
caggagagctctcagaggtctccttgcgagccgcctggggagtccagtgtcgtgaaacag
gaggggaaggttcccagtcgtctggcccttggaagtcgaggtggatacaatgggagatgc
tggggctcacctgtcaggcagaagaagaaacacacaggtatggccagtattgacagcagt
gctcccgaaaccacctctgacagctctccaaccctcagtcggcggccccttcgtggggga
tgggcagccacctcctggggcagaggacaggacagtgacagcatcagcagctcatccagt
gactcactgggctcatcgtcctcgagtggcagcaggagagccagtggtggagcacgtgca
aagactgtggaagttggcaggtataaagggaggcggccggaaagccatgcacctcacgtc
ccaaaccaaccctcagaagcagctgctcacttctactttgaactggccaagacagttctt
atcaaggcgggtggaaacagcagtacctccatcttcactcatccctcctccagcggtggg
caccaggggccccaccgcaacctccatctctgcgccttcgagattgggctctatgcacta
gggctgcacaactttgtgtctcccaactggctctctcgaacctactcctcccacgtctct
tggatcacagggcaggccatggagattggcagcgcagccttgaacattctggtggagtgt
tgggatggacacttgactcctccggaagtggcatcattggcagacagggcttcaagggcc
agggactccaacatggtgcgagcagctgctgaactggcactcagctgcctgccccatgcc
catgccctgaacccaaatgagatccagagggccctggtgcagtgcaaggagcaggataac
ctgatgctggagaaggcctgcatggccgtggaagaggcagccaaaggaggtggggtctac
ccagaagtcttgtttgaagtggcacaccagtggtactggctgtatgaacagactgttggt
gggaccccggcgcagagagaaggagctactggttgcagcgccagtggtgcccgggcaggc
tctgaagcagtgcgtggattgacagacagcagggtgactgctgagcccaccactgtgaca
gtggcagctgcagtgacagcagcagccacagtagtgccagtgatctctgtggggtcaact
atctaccagcagcatacgatggccgggccggcaatggcacatgcacacacccagggcctg
cacccctacactactctccagacccatataccctgtaaccctcagtatattggacaccca
atccagcacatgccacgcccagcagtcttccctgtgcctggctcagcgtacccccagggt
atccacccagcattcataggagcacagtatccctattctgtaacaacaccatctctggca
gctacagcagtgtcgtttcccggtgtgcccgtcccatccatgacacagattgcagtgcac
ccgtaccatgccgagacaggactgtcactgtcttccaacgtagcaatagggagtgtccat
gcggggtcaacattcccagcaattcagggggctcccttgacggctctttcctcgcagccc
aactcccttgttacagggggctttccttcagaggatgaacagcacagtcagcctgtgagc
ccccagggtctgcactacctccactctgcctaccgagttgggatgctggcactggagatg
cttggccggagagctcacaacgaccatcccaacaacttctcccgcagcccgccctataca
gaggatgtgaaatggctcctggggttagctgccaagctaggtgtaaactatgtacatcag
ttctgcgttggcgcagccaagggggtgctgagcccttttgtgctgcaggagatcatcatg
gaagcactacagaggctcaaccctgcccatgtccacaaccacctgcgcactccagccttc
caccagctggtgcagcggtgccagcaggcgtacatgcagtacatccaccaccggttgatc
cacctcaccccagctgactacgatgactttgtgaatgccatccgcagtgcccgaagcgcc
ttctgcttgactcccatgggcatgatgcagttcaacgatatcctccagaacctaaagcgc
agcaagcagaccaaggagctgtggcaaagggtctctctggaaatgaccaccttttccccg
tga
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