Marinobacter sp. RI1: MspRI1_00620
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Entry
MspRI1_00620 CDS
T10737
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03030
DNA replication
mrx03410
Base excision repair
mrx03420
Nucleotide excision repair
mrx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MspRI1_00620 (polA)
03410 Base excision repair
MspRI1_00620 (polA)
03420 Nucleotide excision repair
MspRI1_00620 (polA)
03440 Homologous recombination
MspRI1_00620 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrx03032
]
MspRI1_00620 (polA)
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_00620 (polA)
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MspRI1_00620 (polA)
DNA replication proteins [BR:
mrx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MspRI1_00620 (polA)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MspRI1_00620 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MspRI1_00620 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
Spc24
Motif
Other DBs
NCBI-ProteinID:
BFN12051
LinkDB
All DBs
Position
71568..74294
Genome browser
AA seq
908 aa
AA seq
DB search
MTEQTNPPVVLVDGSSYLFRAYHALPPLTTSKNHPTGAIKGVISMLRRIEQDFPGSKTVV
VFDAKGKTFRHDMYEEYKANRPPMPDDLAVQIEPIHEIVRAMGLPLLIVPGVEADDVIGT
LAHEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETAMDRDGVVEKFGVTPEQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNLIEHADEIKGKIGEYLREATDTLPLSR
ELATIRTDVELEFGLEDLQERQQDDASLLELFKEYEFRTWIAELENGSSSDDGSQNSQPQ
PKPSVEKQYQVITEQADLDQWLKKLKDSDLFSFDTETTSLRYMDAEIVGVSFAVEPGKAA
YVPLGHDYMGAPEQLDRDSVLEQLKPLLEDPKHKKVGQNLKYDKNVLANHDIQLEGIAED
TMVESYVLNSVGTRHDMDSLARTYLDEETITYESIAGKGAKQLTFNQIDLERAGPYAAED
ADITLRLHQTLAPKLKNTGKLESVYREIDLPLVPVLSRMEQRGTLISASTLRQHSQELAE
RMAELEKEAHEVAGEAFNLGSTKQLQAILYDKLGLRVIKKTPKGAPSTAEPVLQELAHEH
ELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPI
RTQEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLSGDRGLLTAFEHGEDIHKATAAEV
FGVAVDEVTGDQRRSAKAINFGLIYGMSAFGLSRQLEVDRKTAQEYIDRYFERYPGVLKY
MDNIRKQAHDDGYVETLYGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMI
EVDNWLRREHANDACMTMQVHDELIIEVREEAVDKVKEGLVKRMSAAASLDVPLLVEAGV
GDNWDQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaaccaaccctcccgtggttctggtggacggatcgtcttacctgttccgt
gcctaccatgccctgccgccactaaccaccagcaagaatcacccgactggcgccatcaaa
ggcgtaatcagcatgttgcggcgcattgaacaggactttccgggttcgaaaaccgtggtg
gtgtttgatgccaagggcaagaccttccggcacgacatgtatgaggaatacaaagccaat
cgcccccccatgccggatgatctggcggtacagattgagcccattcacgagattgtcagg
gcgatgggcttaccgctgttgatcgtgcccggcgtcgaggccgacgatgtcatcggcacc
ctggcccatgaagccaccagcaagggcatcgatgtggtcgtgtctaccggcgacaaggac
atggcccaactggtcagtgaccacgttacccttatcaacaccatgaccgaaaccgccatg
gaccgggacggggtcgttgaaaagtttggtgttaccccggagcagatcatcgattacctg
gccctggtgggtgacaaagtcgacaacattcccggtgtaaacaaatgcggcccgaaaacc
gccgtcaaatggctgcagagctacgacaacctcgacaacctcattgaacatgccgacgaa
atcaagggcaagatcggcgaatacctcagggaagcaaccgacaccctgcccctgagccga
gagctggccaccatccggaccgatgtggaactcgaattcgggctggaagatcttcaggaa
cgccagcaggacgacgccagtctgctggagctcttcaaagagtacgaattccgcacctgg
atcgcggaactggaaaacggctcgtcatcagacgacggctcccagaacagccagccacag
ccgaaaccttcggtggagaagcaatatcaggtcattaccgagcaggcggacctggaccag
tggctgaagaaactcaaagattccgatctgttctccttcgacaccgaaaccaccagcctc
cgctacatggatgccgaaattgtcggcgtgtcgtttgccgtcgagccaggaaaggccgct
tacgtgccactgggccatgattatatgggtgcgccggagcaactggaccgtgactcggta
ctggaacagctgaagccgttgcttgaagacccgaaacacaaaaaggtcgggcagaacctc
aagtacgacaaaaacgtgctggccaaccatgacatacagctggagggcatcgccgaggac
accatggtggagtcctacgtactgaattcggtcggcacccgccacgacatggacagcctc
gcccgaacctatcttgatgaagaaaccatcacctacgaatcgattgcgggcaaaggcgcc
aagcaactgaccttcaaccagatcgatctggaaagagcggggccctacgccgccgaagac
gctgacatcaccctgcgcctgcaccagactcttgccccgaagctgaaaaacaccggcaaa
ctggaatctgtctaccgggaaatcgacctgccgctggtcccggtgctgtcccggatggaa
cagcggggcactctgatcagtgccagcacgctgcgccagcacagccaggaacttgccgag
cgcatggcggaactggagaaggaagcgcacgaggttgccggcgaagctttcaacctgggc
tcaaccaaacaattgcaggccatcctttacgacaaacttggcctgcgggtcatcaagaag
acaccaaagggcgcgccatcgacggccgagccggttctgcaggagctggcccacgagcac
gaactgccccggctgattgtcgagcaccgcagcctgagcaagctgaagtccacttatact
gacaccctgcccgagcttatccaccaccgcaccgggcgagtgcacacttcctatcaccag
gcagtgacagcgacaggacgtttgtcttcatcggaacccaacctgcagaacattccgatt
cggacccaggaaggccgacgcatacgccaggcatttattgccccgaaaggctacaagctg
ctggccgctgactactcccagattgagcttcgcatcatggctcacctgtctggcgataga
ggcctactgaccgcgttcgaacacggcgaagacattcacaaggccaccgcagccgaagtt
ttcggcgtggcggtggatgaggtaaccggcgaccagcgtcggagtgccaaggcgatcaac
ttcgggctgatctacggcatgtcggcattcggactttcgcgccagctggaagtggaccga
aaaaccgcccaggaatacatcgaccggtatttcgagcgttaccccggcgtactcaaatac
atggacaacatccgcaaacaggcccatgacgacggctacgtggaaacgctctacggccgc
cgcctgtacctgccggagatcaacgcacgtaacaagcagctgcagcaggccgccgagcgc
actgccatcaatgcgcccatgcagggcacggccgccgatatcatcaagcgggccatgatt
gaggtagacaactggctgcgccgcgaacacgccaacgatgcctgcatgaccatgcaggtc
cacgacgaactgatcatcgaagttcgcgaagaagccgtagacaaagtcaaagaaggcctg
gtcaagcgcatgtccgccgccgccagcctggatgtgccactgctggtggaagctggtgtg
ggtgacaactgggaccaggctcactaa
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