Marinobacter sp. RI1: MspRI1_01230
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Entry
MspRI1_01230 CDS
T10737
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx00130
Ubiquinone and other terpenoid-quinone biosynthesis
mrx01100
Metabolic pathways
mrx01110
Biosynthesis of secondary metabolites
mrx01240
Biosynthesis of cofactors
Module
mrx_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
mrx_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
MspRI1_01230 (ubiD)
Enzymes [BR:
mrx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
MspRI1_01230 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
BFN12112
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Position
complement(143521..145008)
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AA seq
495 aa
AA seq
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MKYNDLRDFVSQLEKLGELKRITAEVDPHLEMTEICDRTLRAGGPALLFENPKGYDMPVL
ANLFGTPKRVALGMGQDDVAALREIGKLLAFLKEPDPPKGFKDAIEKLPLFRQVMRMSPK
VLRSAPCQDVVIEKDKVDLYQIPVQHCWPGDAGPLVTWPLVITRGPNKERQNLGIYRQQV
IGRNRLIMRWLSHRGGALDYQEFRKANPDKPYPVAVALGADPATILGAVTPVPDTLSEYA
FAGLLRGSRTELVNAGLSDLQVPASAEIVLEGFIYPDDMAPEGPFGDHTGYYNEVDQFPV
FTVERITHRRDPIYHSTYTGRPPDEPAILGVALNEVFIPILQKQFPEIVDFYLPPEGCSY
RLAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVTDDDVNARNWEDVIWAITTRMDP
ARDTTLVENTPIDYLDFASPVSGLGSKMGMDATNKWPGETDREWGTAIAMTDEVKQRVDD
IWDSLGIEIPGARPD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaacgaccttcgggactttgtcagccagctggaaaagctgggtgagctcaag
cgcattactgccgaagttgacccccacctggaaatgaccgaaatctgcgaccgcaccctg
cgtgccggtggtccggcgttgttgttcgagaatccgaaaggctacgatatgccggtgttg
gccaacctgttcggaacaccgaaacgggtggcactgggcatggggcaggacgatgtggca
gcgttgcgggagattggcaagctgctggcgtttctgaaagagccggatccccccaagggc
ttcaaggacgccattgaaaaactgccattattccggcaggtcatgcgcatgagccccaag
gtgttgcgctcggcaccctgccaggatgtagtgattgaaaaagacaaggtggatctgtac
cagataccggtccagcactgctggccgggtgacgccggtcctctggtgacctggccgctg
gtgattacccgtggccccaacaaggaacgtcagaacctgggtatctaccggcagcaggtg
attggtcgtaaccgtctgattatgcgctggctcagccatcgggggggcgccctggattac
caggagttccgtaaggccaacccggacaagccctatccggttgcggtcgcactgggtgct
gatccggccaccattctgggtgccgttaccccggtgccggatacgctgtctgaatatgct
tttgcaggattgctgcgaggtagtcgaacggaactggtgaatgcgggcctgagcgatctt
caggtaccggccagtgccgagattgtactggaaggctttatctacccggacgatatggcg
ccggaagggccgtttggtgatcacaccgggtattacaacgaagtggatcagttcccggtg
tttaccgtggaacgcattacccaccgccgggatccgatctatcacagcacctatactggc
cggccaccggacgagccggcgattctcggagtggcgctgaacgaggtgttcattccaatc
ctgcagaagcagtttccggaaattgtcgatttctatctgccgccggaaggctgttcctac
cggcttgccgtcgtcaccatgaagaagcagtatcccggccatgccaagcgggtgatgatg
ggggtatggtcatttctgcggcaattcatgtacaccaagtttgtgattgtcaccgatgac
gacgtcaatgcccgtaactgggaagacgtgatctgggccattactacgcggatggatccg
gcccgggacaccaccttggtggaaaacaccccgattgactatctggactttgcctcgccg
gtgtctgggctcggctcgaagatggggatggacgccaccaacaagtggcccggagagacc
gaccgggagtggggcactgccatcgccatgaccgatgaggttaaacagcgggtggatgac
atctgggacagcctggggattgaaattcccggtgcccgccccgactga
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