Marinobacter sp. RI1: MspRI1_02920
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Entry
MspRI1_02920 CDS
T10737
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03030
DNA replication
mrx03430
Mismatch repair
mrx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MspRI1_02920
03430 Mismatch repair
MspRI1_02920
03440 Homologous recombination
MspRI1_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrx03032
]
MspRI1_02920
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_02920
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MspRI1_02920
DNA replication proteins [BR:
mrx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MspRI1_02920
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MspRI1_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BFN12281
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All DBs
Position
334310..335032
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AA seq
240 aa
AA seq
DB search
MSSVIKSGNSKQNWPENYRKGAEQAKDARIRAFYEAGCPSPDTPVRDVPLVALDFETTGL
EADQHSIVSIGLVPFTLTGIQLGQCWHQVVRPRLPLHKTSVTIHGITHSEIENAPDLEDV
LDPLFEHLNGRIPVVHYRNIERPFLNTALQWRLNEQLRFPVIDTMAIEAHLHPNRNPSRW
QQLMGKKPISIRLADSRLRYGLPHYASHNALIDAIATAELLQAQVLHHFSPETPIGDLWV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgtgatcaaaagcggcaacagcaagcagaattggccagagaactaccgcaaa
ggcgccgaacaggcaaaagacgccagaatccgcgccttctacgaagccggctgccccagt
ccggacacgcctgtccgggacgtccccttagtggccctggacttcgaaaccactggcctg
gaagccgaccagcattccatcgtcagcatcggcctggtgccctttaccctgacaggtatc
cagctcggccaatgctggcaccaggtggttcgacccagactgcccctgcacaaaacctct
gtgaccatccacggcattacccacagcgaaatcgaaaacgccccggacctggaagacgta
ctcgacccgctgttcgaacacctcaacggccgaatccccgtggtgcactaccgcaacatc
gaacgcccgttcctgaacaccgccctgcaatggcgcctgaacgaacaactccgcttcccg
gtcatcgacaccatggccatcgaagcgcacctgcacccaaaccgcaaccccagccgctgg
cagcaactgatgggcaaaaagccgatctccatccgcctggccgacagccggctccgctac
ggcctgccccactatgcctcccataacgccctgatcgacgccatcgccacagccgagctg
cttcaggcccaggtactgcaccacttcagcccggagacccccattggcgatctgtgggtg
tga
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