Marinobacter sp. RI1: MspRI1_04860
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Entry
MspRI1_04860 CDS
T10737
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03440
Homologous recombination
Brite
Enzymes [BR:
mrx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MspRI1_04860 (recC)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MspRI1_04860 (recC)
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GFIT
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NCBI-ProteinID:
BFN12475
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Position
543531..547124
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AA seq
1197 aa
AA seq
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MADSTAIEPGFHAIHANHLEDLRRAVVYICRQNPMPPLQSETFLVQSNGIAQWLKLALAE
KRTEDGVEGGLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPE
LVGQDEAFTPLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITAR
GEEKALDTEACWQPLLWRKLVEDVGSEAHTSRSQIHTRFMAQGQRISEPANASRLPKRIV
VFGVSSLPRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPVLS
QIDDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTDHGDVD
NPCLLHQLQNDIHNLTPLQEIRQQQRTVDLTRDHSVVFHDAHGPQREVEILHDQLLAAFN
ADPTLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQGQRHHEPVLIALET
LMSLPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIRWGLHGKHRESLDL
PAELERNTWQAGLRAMLLGYGMGDDQPWGGVEPYGEIGGLQASLAGRLGEFVHQLEALWQ
ALQATRTPGEWEVLFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLDDALAAGLEQQPLPL
NIVKDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYPRSRPPVDF
DLMAQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDSERPPSVLIGQLQDH
LNSLWTVAGQPDGSVTRALTTQHPLQPFSRDYFPRTNGVGEGEETQPKPLADVLQARGLF
TYEREWRSAHAVDNPEQSREALPYQTPEEPISLNELANFLKKPIDIFYQRRLQVRFEAVE
EDDTDNENFDLNGLDRWRLDNELIHEGVVKAASEEELHERLEATLDRMARRGDLGMGVTE
HRLRTELAGRLPDLFQRYRGALAEWPEAVAEPLPFEFRYSDSTGAVEVVDLIDNLRCNPS
GQLCRLVIANSGLLTGSGYSKKVRYANLLRDWLVHLAGQLSGQPYETVILGKEEGRKFHF
PVMAPEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWITSFYGGKKSVGDHERAISEAEQ
AYSTALDRDTGYLLGAFESPEALMASGEFEALLHQLYVPLWEAEQGKSAAEQIGSME
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctaccgccattgaacccggctttcacgccatccatgccaaccatctggaa
gacctgcgccgcgccgtggtctatatctgccggcagaaccccatgccgccgctacagagc
gagacctttctggtgcagagtaacggcattgcccagtggctgaagctggcgctggcagag
aagcgcaccgaggatggcgtggaaggcggcctgggcattgccgccggcatggatttcctg
tttcctgcccggttcatctggcaggcctatcgggcggtgttgcccgacggcgaagtaccg
gagcagtcccccttcgacaagcgccgcctggtctggcggctgtaccgattgttgccggag
ctggtggggcaggatgaggccttcacaccactggcgcgattcctggacggccgcgatacc
gatctgcgcaatttccagctggcggagaaagtggcggatctgttcgaccagtaccaggtg
ttccgggccgactggctcgcggcctgggaacagggcaaggatgtggtgatcacggcccgg
ggcgaggagaaagctctggatacggaagcctgctggcagcccctgctctggcgcaagctg
gtcgaggacgtgggcagcgaggcccacaccagccgttcgcaaatccacacccgctttatg
gcccagggccagcgcatcagcgaaccggccaatgccagtcgcttgcccaagcgcatcgtg
gtgttcggagtatcgtcgctgccccggcaggcgctggaagccctgtatgtactgagccgg
ttcagccaggtggtgctgtgcgtccacaacccctgccagttctactgggccgacatcatc
agcgaccgggaactgttaaaagccgaacgcaagcggggcgcagcacacccggtgttgtcg
caaattgacgacccggaccagttgcaccagcacgccaacccgttgctggcggcctgggga
aaacagggccgggactacatccgcctgctggatgagttcgacaacccggacgactaccgc
gccagtttccagacgccgggccagaagatcgacatcttcaccgaccatggcgatgtggat
aacccctgcctgctgcaccagttgcagaacgatatccacaacctgacgccgctgcaggaa
atccgccagcagcagcgcacggtggatctgacccgcgaccattccgtggtgttccacgac
gcccacggcccccagcgggaagtggaaattctgcacgaccagctgctggctgcgttcaat
gccgatccgacactgcggccccgggatgtgatcgtgatggtgcctgacatcaacgtgtac
gcgcctcatattcaggcggtgttcggtcgctactcgccgggccgcaagcgccacattccg
ttcaccatttccgaccagggacagcgccaccacgaaccagtgctgattgccctggaaacc
ctgatgtcattgccccgcagccgcttcggtgtgagcgaaatcatcagcttgctggaagta
gccggcatccgcgaccgctttgacatcagcgaagacgacatccctctggcccggcgctgg
gtggaaggcgccaacattcgctggggcctgcatggcaagcaccgggaaagcctggacctg
ccggcagagctggaacgcaacacctggcaagcagggctgcgcgccatgttgctgggttat
ggcatgggcgatgaccagccctggggcggggtagagccctatggtgaaatcggcggcctg
caagccagcctggccggtcgcctgggcgaattcgtgcaccagctggaagccctgtggcag
gcactgcaggccacccgcacgcccggggaatgggaagtcttgttctccgccatgctggag
cagtttttccacaaggtggaaggccaggacctgctgttgctgaaccgcttccgccgtcag
ttggagcagtggctggacgatgccctggccgccggactggaacagcaaccgctgcccctg
aatatcgtcaaggatgtgctgctgcagggcctggatgagggcggcctgaaccagcgtttc
ctggccggcaaggtcaacttcgccaccctgatgccgatgcgggccattccgttccgcaag
gtctgcctgctgggcatgaacgacggcgattaccctcgctcccggccgccggtggatttc
gacctgatggcccaggattatcggccgggggaccgctcccgccgggaagacgaccgctac
ctgtttctggaagccttgttgtccgcccgggaacagctgtacatcagctgggtggggcgc
agtatcagggacgactccgaacggccaccctcggtgctcatcggccagttacaggaccac
ctgaacagtctgtggaccgtggcggggcaaccggatggttctgttaccagggctctgacc
acccagcatccgctgcagcctttcagccgggactatttccccagaaccaacggcgtgggc
gagggtgaagagacccaacccaaacccctggccgacgtgctgcaggcccggggactgttc
acctatgaacgggaatggcgcagcgctcatgcagtggataacccggagcagagccgggaa
gcgctgccgtaccagacgcccgaagagcccatcagcctgaacgagctggcgaatttcctg
aaaaagcccatcgacatcttctaccagcgccggctgcaggtgcgctttgaagcggtggaa
gaagacgacaccgataacgaaaacttcgacctgaacggcctggaccgctggcgcctggac
aacgagctgatccatgagggtgtcgtcaaagcggccagtgaagaggagttgcacgaacgc
ctggaagccactctggaccgtatggcccggcggggcgatttgggtatgggggtgaccgaa
catcgcctgcgcaccgagctggccggccgcctgccagacctgtttcaacgctaccgcggc
gcgctggccgagtggccggaagcagtggccgagcccttaccgttcgagtttcggtactcg
gatagcacaggcgcagtggaggtggtcgatttaatcgacaatctgcgctgcaacccttca
ggacaactgtgccgactggtgatcgccaactccggtctgctgaccggctccggttactcg
aaaaaagtccgctacgccaatctgctgcgggactggttggttcacctggccgggcaactc
agtggccagccctatgaaaccgtgatcctgggcaaggaagaaggccgtaaattccacttc
ccggtcatggccccggagcaggcacaaaagcacttcgaagccattctgggccgctggatg
gaagccaccacccggaccctgcccattcactgcgaagccggctttgcctggatcaccagt
ttctatggcggcaagaaatctgtcggcgaccacgaacgggccattagcgaagcagaacag
gcctattccaccgccctggaccgggacaccggctacctgctgggtgccttcgaaagtccc
gaggcactgatggcgagcggcgagtttgaagccctgctgcaccagctttatgtgcctctg
tgggaggccgaacagggcaaatcggcggcggagcaaatcgggagtatggaatga
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