Marinobacter sp. RI1: MspRI1_06000
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Entry
MspRI1_06000 CDS
T10737
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
mrx Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrx03009
]
MspRI1_06000
Enzymes [BR:
mrx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
MspRI1_06000
Ribosome biogenesis [BR:
mrx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MspRI1_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BFN12589
LinkDB
All DBs
Position
679454..680452
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AA seq
332 aa
AA seq
DB search
MANRTSTRLNKYISESGMCSRRDADRFIEQGNVHINGRRAQVGDQVLPGDVVKVNGQVVE
PRDEEDLVFIALNKPVGIVSTTDSAEKDNIQRFVGHSERIFPIGRLDKDSQGLIFLTSNG
DLVNKILRAGNNHEKEYLVTVDKPVTWEFVEGMSNGVPILGTMTKRCKVEKVSRFVFRIT
LVQGLNRQIRRMAEYFGYEVTRLERVRIMNVSLQGLPVGAWRDLTEKELAVLFDAIRDSS
SEATEPAGSKPRKKPAGARGARPGPGGKPARAGAKAGGKSPAGKGRKGPGSGPGKRPSGK
PGGGPKPGGRGPGSKGKPSKPGKPRKPSIKKR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgaacctcaacccgactgaacaaatacatcagcgagagcggtatgtgctcc
cgtcgggatgccgaccggttcatcgagcagggcaacgtgcacatcaacggccgccgggcc
caggtgggcgatcaggtgttgcccggagatgtggtgaaggtcaacggccaggtagtggag
ccgagagacgaagaagatctggtgttcattgctctgaataaaccggtgggtattgtcagc
accaccgacagcgcggagaaagacaacatccagcgttttgtcggccacagtgaacggatt
tttcccattggccggctcgacaaggattcccaggggctgattttcctgaccagcaatggc
gatctggtgaacaagatcctgcgcgccggcaataatcacgagaaggaatacctggtcacg
gtcgacaagccggtcacctgggaattcgtagagggaatgagcaacggtgtgccgattctg
gggaccatgaccaagcgctgcaaggtcgaaaaggtgtcccggtttgtgttccgcattacc
ctggttcagggcctgaatcgccagattcgccgtatggcggagtactttggctacgaggtg
accaggctggagcgagtgcgcatcatgaacgtcagtctgcaggggttgccggtgggtgcc
tggcgggatctgacggagaaggaactggcggtactgttcgatgccatccgggattcctcg
tccgaggccacggagcctgccggcagcaagccccggaagaagccggcgggtgcgaggggc
gctcgcccggggcctggtggcaaaccggcgcgggctggcgcaaaagctggcgggaagtca
ccggctggtaaagggcgaaaaggccccggttccgggcccggtaaacggccctctggtaaa
cccggtggcggcccaaagccgggtggtcgtggtccggggtccaagggtaaaccatcgaaa
ccgggcaagccccgcaagccgtccatcaagaaacgttga
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