Marinobacter sp. RI1: MspRI1_07540
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Entry
MspRI1_07540 CDS
T10737
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03420
Nucleotide excision repair
mrx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MspRI1_07540 (pcrA)
03430 Mismatch repair
MspRI1_07540 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_07540 (pcrA)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MspRI1_07540 (pcrA)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MspRI1_07540 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MspRI1_07540 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_12
Serendipity_A
Motif
Other DBs
NCBI-ProteinID:
BFN12743
LinkDB
All DBs
Position
complement(862560..864908)
Genome browser
AA seq
782 aa
AA seq
DB search
MRLSYAGIMRQRYPHYQLASTIATMPSQTQAPDHLSLPDYLTDEQRAIITAGYEHAVITA
VAGSGKTSTLAWRIRYLLTQGHDPDRMLVLMFNRSAKVDFERKLQSVCEQSGLALPEIRT
YHAMGLRLYRRFVREGYLPGFSEKILTEQEIGFQAWLLTRRLAPEELADEIRRNKKDFVE
TATGFIDRVKTGLAPAEVVFEELGYSDKHRYLIDLFHSFEQWRKSESRISYADMLYEPVM
AIHQNPPLQRLVGNKMDLILVDEYQDTNEIQHLLLRYVAGDRARVTVVGDPDQTIYEFRG
ARPEFILRKFSDEFESPLEQTLSYTFRYGHRVALLANHLICHNTGRRDVMCHSHPGTPAT
EIHLHQAENDGNQVLAILQGLAPEQQSQSAILFRVWSQSVPIELKLLARQIPYRIDAGKG
ALFSREVQAVQALLLVVTRRLDKLAENDRLDIARQILRFPHVGLKEPELENLARFLAAFD
TGWHERLLSLDFDALAPMAARKLKKLGEVLQQLDRYQGPVAGLITVYAEHMDLYEGIRSL
ALTHDSAEERIDTIQGFRDYLKSLEVNADGALDHLTLLKQQASEHRDEGVLLSSIHRTKG
LEWPVVIIPGLQEKYLPYSPRPQDDARALLESERRLLYVGMTRTRHHLHLITRPTPASPH
LAGEQGPSRFVSELCFGLAQELGSALDTGTAPTDQPLKLDHPLTPVSLRYAEREGVQLES
EGTVSPNTAEPVWHQQRLTHAIFGTGEVISEDESSFEVRFGNGDRLNFSKKSAHLYFTPA
GD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcctgagctatgccgggattatgcggcagcgctatccgcactaccagttggccagt
acaatagcgactatgccgagccaaacccaagcccccgaccacctgtccctaccggattac
ctgaccgacgagcagcgcgccatcatcacggccggttacgagcatgcggtgattacggcc
gtggcgggcagtggtaaaacctccacgctggcctggcgcatccgctacctgctgacccag
ggccacgacccggaccggatgctggtgctgatgttcaaccgcagcgccaaggtagacttc
gaacgcaagctgcagtccgtctgcgagcagagcgggctggcgctgccggaaatccgtacc
taccacgccatgggcctgcggctgtatcgtcggtttgtccgggaaggctatctgccgggc
ttttcggaaaagatcctgaccgaacaggagatcggcttccaggcctggttgctgacccgg
cggctggcaccggaggaactggccgatgaaatccgccgcaacaagaaggattttgtcgaa
accgccaccggctttatcgaccgggtcaaaaccgggctggcacccgcggaggtggtgttc
gaggagctgggctactccgacaaacaccgctacctgatcgacctgttccattccttcgaa
cagtggcgcaaaagcgaaagccgcatcagctatgccgacatgctgtatgagccggtgatg
gccatccaccagaacccgccgttgcagcgtctggtgggcaataaaatggatctgatcctg
gtggacgaataccaggacaccaacgagatccagcacctgcttctgcgttatgtggccgga
gaccgtgcccgggtaaccgtagtcggcgacccggaccagaccatctacgagttccggggt
gcccggcccgagttcattctgcgcaagttcagtgatgagtttgaaagcccgctggagcag
accctcagctacaccttccgttacggccaccgggtggcgctgctggccaatcacctgatc
tgccataataccggccgccgggatgtgatgtgccattcccatccgggtacccccgccacc
gaaatccatctgcatcaggccgaaaacgatggcaaccaggtgctggccatcctgcaggga
ctggcgccggaacaacaaagccagagcgccatcttgttccgggtctggagtcagagcgtg
ccgattgaactgaaactgctggcacgccagatcccctaccggatcgacgccggtaagggc
gcgctgttcagccgcgaggttcaggcagtgcaggccctgttgctggtggttacccgtcgg
ctcgacaagctggcagaaaatgaccgactggacattgcccgccagattctgaggttcccc
cacgtaggcctgaaagaaccggaactggaaaacctggcccggttcctggcggcgttcgac
accggctggcacgaacggctgctcagtctggatttcgacgccctggcgcccatggcggcc
agaaagctgaaaaaactcggtgaagtcctgcagcaactcgaccgctatcaggggccggta
gctggcctgatcaccgtctatgccgagcacatggatctctatgagggtattcgcagtctc
gcactaacccatgacagtgccgaggagcggattgataccattcaggggtttcgcgactac
ctgaaaagcctggaagtcaatgccgacggggccctggaccacctcactctgctgaagcaa
caggccagcgaacatcgggacgagggtgtcctgctgtccagcattcaccgaaccaaggga
ctggaatggcccgtggtaatcattcccggcctgcaggagaaatatctgccctatagcccg
cgcccccaggacgatgcccgggccctgctggaaagcgagcgcaggctgctctacgtgggc
atgacccgcacccgccaccatctgcacctgatcacccggcccaccccggccagcccgcac
ctggcgggcgaacaaggccccagtcgattcgtttccgaactgtgctttggattggctcag
gaactcggctccgcgctggataccggtactgccccaacagaccagcccctgaagctggac
cacccgttaacccccgtgagtctgcgatacgctgaacgcgagggcgttcagctggaaagc
gaaggaacagtcagcccaaacacggcggaaccagtgtggcatcagcagcgtctgacccat
gctatctttggcacaggtgaggttatctcggaagatgaaagctcgttcgaggtccggttt
ggcaatggcgacaggctgaatttcagtaaaaaaagcgcgcacctgtatttcacgccagcg
ggtgattga
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