Marinobacter sp. RI1: MspRI1_07660
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Entry
MspRI1_07660 CDS
T10737
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03420
Nucleotide excision repair
mrx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MspRI1_07660 (uvrD)
03430 Mismatch repair
MspRI1_07660 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_07660 (uvrD)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MspRI1_07660 (uvrD)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MspRI1_07660 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MspRI1_07660 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
VMAP-M2
Motif
Other DBs
NCBI-ProteinID:
BFN12755
LinkDB
All DBs
Position
878648..880813
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AA seq
721 aa
AA seq
DB search
MDVSHIIDSLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRMAWLMSVDRVPPTSILAV
TFTNKAAKEMRYRVEQMMQIPTRGLWIGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVMRENRIDESQWPPKQAQWFINSQKDEGLRADHIQENPGDHFTNTMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLSHYQQRFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNSRLVRLEQNYRSTKTILKAANSVIAN
NQGRLGKELWTDGVEGEPISLYAAFNEQDEANYIADSISAWVSEGNLRSECAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVHYHRDDAAFERVVNIPTRGIG
AKSLQEIREYATGQGISLWESSERLLAAGQVKGRAKTGLQQFMEIINMLSEMAGHASLQG
LMKQAIESSGLKDYHASEKGEKGQARVENLEELVSALADYDVEEGVDPLAEFIAQAALDA
GESQADAHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPGDCLQEVRLRNTVTRPAMVERPNES
LFAQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctctcatattattgattccctgaacgacgcccagcgcgaagcggtgacggcg
cagaacgaccatttgctggtgctggccggtgccggcagtggcaaaacccgcgtgctggtg
caccggatggcatggttgatgtcggttgaccgggtgccgcccacgtccattctggcggtg
actttcaccaacaaggccgccaaggaaatgcgttatcgcgtggagcagatgatgcagatt
cccacccgtggtctgtggatcggcacctttcacggaattgcccatcgtttgcttcgttcc
cactggaaagacgccggcttgccggaaaacttccaggtgttggacagcgacgatcagttg
cggctgatcaagcgggtgatgcgggaaaaccgcattgatgaaagccagtggccgccgaaa
caggcccagtggttcatcaacagccagaaagacgagggcttgcgggcggatcatattcag
gagaatccgggcgatcacttcaccaacaccatgctgaagatctaccgccagtacgagaag
ctctgccagcagggcggcttggtggattttggcgaactgttgctgcggtcccacgaactc
tggctgcatcgtccggaattgctgagtcactaccagcagcgcttccagcacatactggtg
gacgagttccaggacaccaacaccattcaatacgcctggctgcaggtgctggccagcaac
cgggtgccgctgacggtggtgggcgatgacgaccagtccatctacggctggcggggcgcg
aagatcgagaatatccagcagtaccagcgggatttccccaattcccggctggtccggctg
gagcagaactaccgctccaccaagaccattctgaaagccgccaattcggtaattgccaac
aaccaggggcgtttgggcaaggaactctggactgacggggtggaaggtgagccgatcagt
ctgtacgccgcgttcaacgagcaggacgaagccaactacattgccgattccatctcggcc
tgggtcagcgagggcaatctgcgcagcgagtgcgccattctctatcgttccaatgcccag
tcccgggtgctcgaagaagccctgatgcgccagggtattccttatcgagtttacggcggg
ttgcggttctacgatcgtcaggaaatccgaaacgcgttggcttacctgcgcctggtgcat
taccaccgggacgatgccgcctttgagcgggtggtgaatattcccacccgcggcattggt
gccaagagcctgcaggaaattcgtgaatacgccaccggccagggtatttccctgtgggaa
tcgtccgagcggttactggccgcgggccaggtgaagggccgggcgaaaaccggcctgcag
cagtttatggagatcatcaacatgctgtctgaaatggctgggcatgcttcactgcagggg
ctgatgaagcaggcgattgagtccagtggcctgaaggattatcacgccagtgagaagggc
gagaagggtcaggcccgggtggaaaacctggaggaactggtcagcgcgctggcggattat
gatgtagaagaaggcgtagatccgctggcggagtttatagcccaggcggcgctggatgcc
ggcgaatcacaggccgatgcccatgaggacagtgtgcagttgatgacgctgcattcggcc
aaggggttggagtttccgatggtgttcctggcaggtgttgaggagggtttgttcccgcac
agtatgtcgctggaggagcccgggcgcatggaggaagagcgccgcctggcctatgtgggc
attacccgggccatgaaaaagctggtacttacttacgcggaatcccgtcggttgtatggt
caggagaagtttcacgcactgtcccggtttgtgcgggagatcccgggtgactgtctgcag
gaggtgcggttgcgtaatacggtgacgcggccggcgatggtggagcgaccgaatgagagt
ctgtttgcccaggattcggcccagcagtctggcttcagtctgggccagcgggtgcgccat
cccaagtttggcgagggaattgtgatgaactccgagggcaccgggcatcacacccgcgtg
caggtgaacttcgatgagggcgccaagtggctggtgctggcctatgcgccgttggaggcc
tgctaa
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