Marinobacter sp. RI1: MspRI1_07940
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Entry
MspRI1_07940 CDS
T10737
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mrx Marinobacter sp. RI1
Brite
Transcription machinery [BR:
mrx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MspRI1_07940 (rapA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFN12783
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Position
905414..908275
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AA seq
953 aa
AA seq
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METSEFVIGQRWVSHSDTALGLGIVTDISGRRVTLGFPAADEERTYAIDNAPLSRIVYQQ
GEEIETFDGERYTVRAVEDLDGVLVYHADDGENIQPISEVKLAGSVNFSAPHQRLFAGQF
DRNGAFRLRVATLQHMDRLRASPAQGLIGARTQHLPHQLYIAHEVARRHAPRVLLADEVG
LGKTIEAGLILHYQLQTGRARRALIVVPDSLIHQWLVEMLRRFNLRFSIIDQARYDDLKA
EEDDVDALVNHIFGDDDAVNPFESDQLVLCSLDFLVRSEKARKDAVAAGWDLMVVDEAHH
LAWSPEQSSPEYDVVEQLSGASQGLLLLTATPEQIGVASHFARLRLLDPARFHNLETFRE
EEQHYEVINQVVRRLQQAPDTISKDDRQALAGWLGDELDELLARNDAHQAVIDALLDRHG
TGRVLFRNTRAAIQGFPERQPLPEPLPCPDLYEHHQYGVTGLAPEQSVDEEDWLAQDPRV
SWLEKKLASLRPAKVVVICAKASTAMALEHYLQLRAGIRSAAFHEHLSLIERDRAAAYFA
DTEQGAQALICSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQTEAIRIHIP
YLQGTSQEVQYRWFQEGLNAFAESCAVGVAVQEHVQGQWQQALDGDESQLEPLVAASASE
TARLKDILHNGRDALIELNSCRVDEAEALIAGIEEEENAAEVRDYMIQAFDILGVDLEDH
SEHADILKPGEQFQAGLVAELPEDGLTVTWDRQQALQREDMAFMSWEHPMVTGVMDSVNS
SGLGKAALANLSVKALPPGTLLLEAVFAVHCPAPESLQLTRYLPVSPLRLVVDVNGRDLS
KALPHERLNELCSNIRRRTAQAIVPKIRAEVETMVDHVETLAEPHLSPLREQALARVEDS
FMPEIRRLEALQKVNPAIRNEEIDFLRTQLDAARSAVEHASLALEGIRVIVTS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacatcggaatttgtcatcggccagcgttgggtcagccacagcgatactgccctg
ggtctgggtatcgtgacggacatctcaggtcgccgagtcaccctgggattccccgccgcc
gatgaggaacgcacctatgccatcgacaatgcgcccctgtcacggatcgtgtatcaacag
ggcgaggaaatagagacctttgacggtgagcgctataccgtgcgcgcagtggaagatctc
gatggcgttctggtgtatcacgccgatgacggtgagaatattcagccgatttccgaggtt
aagctggcgggctctgtgaatttttccgcgcctcatcagcgcctctttgccggccagttt
gatcgcaacggtgccttccggcttcgagtcgccacccttcagcacatggaccgtctgcgg
gcgtcgccggcccaggggctgattggggcacgcacccagcacctgccgcaccagctttat
attgcccacgaagtggcacgccggcatgctcccagggttctgctggccgatgaggtcggt
ctgggtaaaaccattgaggcaggtctgattcttcattatcagctgcagaccggtcgagcc
cgccgggcgctgattgtggtgcccgattcactgatccaccagtggctggtggaaatgctg
cggcgtttcaatctgcgcttttccattattgatcaggcccggtacgacgacctcaaggcc
gaagaagatgatgtcgacgctctggttaaccatatttttggtgatgacgatgcggttaac
ccgtttgaatctgaccagctagtgctgtgtagcctcgacttcctggtgcgcagcgagaag
gcccgcaaagacgcagtggcggcgggctgggatctgatggtggtggacgaagctcatcac
ctggcctggtcgccggaacagtccagcccggaatacgatgtggttgagcagttgtccggt
gccagccagggcctgctgctgctgaccgcaacaccggaacagatcggcgtggccagccac
tttgcccgcctgcgcttgctcgacccggcccggttccacaatctggagaccttccgggaa
gaagaacagcactatgaagtgatcaatcaggtggtccggcgcctgcagcaggcgccggat
actatctcaaaagacgatcggcaggccctggccggttggctgggagatgagctggacgaa
ttgctggcccggaatgatgcccaccaggcggtgattgatgcgttgctggatcgtcacggc
accgggcgagtgttgttccggaatacccgggccgccattcagggcttcccggagcgacag
ccgttaccggaacccctgccgtgcccggacctgtatgaacaccatcaatacggtgtcacc
gggctggcgcccgagcagtcagtggatgaagaagactggctggctcaggatccccgggtg
agctggctggagaagaaactggccagcctgcgcccggccaaggtggtggtgatctgtgcc
aaagccagcacggccatggcacttgagcattatctgcagttacgggccggtattcgcagt
gcagccttccacgaacaccttagtctgattgagcgcgaccgggccgcggcctattttgcc
gatacggagcagggggcacaggcgctgatctgttcggaaatcggcagcgaggggcgcaac
ttccagtttgcccaccatctggtgctgtttgatctgccggctaatccggatctgctggaa
cagcgcattggtcgcctggaccggatcggccagaccgaagcgatccgtattcacatcccc
tatcttcagggcaccagtcaggaggtacagtaccgctggttccaggaagggctgaatgcg
tttgccgagagctgcgccgtgggtgttgctgttcaggaacatgttcagggccagtggcag
caggccctggacggagacgaaagccagttggagccactggtggcggccagtgcgtctgag
acggcgcgtctgaaagacatattgcacaacggccgggatgcgctgattgaactgaactcc
tgtcgtgttgatgaggctgaggctttgatcgccgggatcgaggaagaggagaacgccgct
gaagttcgggactacatgattcaggctttcgatatcctcggcgtcgacctggaagaccac
agtgagcatgcggatatcctgaagccgggcgagcagttccaggccggcctggtggcggag
cttccggaagacgggctgaccgttacctgggatcgtcagcaggcgttgcagcgcgaagat
atggcgttcatgagctgggagcacccgatggttaccggggtgatggattcggtgaatagt
tccggtctgggcaaggctgccctggccaatctctcggtcaaggctctgcccccggggacg
ctcctgctggaagccgtattcgcggtgcattgtccggcgcccgaatcgctgcagttgact
cggtatctgcccgtttcgcccctgcgcctggtggtggatgtgaatggccgggatctgtcc
aaggctctgccccatgaaaggctgaatgagctttgttccaatatccgtcgacgcacggcc
caggccatcgtgccgaaaatccgggccgaggtggaaaccatggtcgaccacgtcgagaca
ctggcggagccgcatctgtcaccgcttcgcgaacaggcgctggcgagggtagaagacagc
tttatgccggagattcggcgtctggaagcactgcagaaagtgaacccggccatccgcaac
gaagaaatcgacttcctgcgcacccagctggatgccgcccgcagtgctgtagagcatgcg
tccctggccctggaaggtatccgtgtgattgtcacatcgtaa
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