Marinobacter sp. RI1: MspRI1_11020
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Entry
MspRI1_11020 CDS
T10737
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mrx Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrx03016
]
MspRI1_11020 (truB)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MspRI1_11020 (truB)
Transfer RNA biogenesis [BR:
mrx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MspRI1_11020 (truB)
Prokaryotic type
MspRI1_11020 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BFN13091
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Position
1257586..1258509
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AA seq
307 aa
AA seq
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MSRRRKGRDVNGILVIDKPQGVTSNGILQQVKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQTMLDSDKAYITTARLGIRTETGDSEGAVVEEKPVPQFSEDEVEAVLARFRGDIQ
QVPSMYSALKHQGRPLYEYAREGIEIERPARPVTIYELKLLAVREQELDLAVTCTKGTYI
RSLVEDIGEVLGCGAHVSALRRTLASGYTLANAHDVKDLEAMRERGESLDGLLLPPETAL
TMFPEYRLSGVPLVSILNGQPVRIPDQPFEGFVRLYGEHSFVGLAEALPEGDGTQLVPRR
LVKNSKR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgaagacgcaaaggccgtgacgtaaacggcatcctggtgatcgacaagccccag
ggcgttacctccaacgggattctgcagcaggtcaagcgcctgtatggtgcggcgaaggcc
ggccataccggtgcgcttgatccgctcgccactggcgtgctgcccctgtgttttggtgag
gccaccaagttctcccagaccatgctggacagcgacaaggcgtatatcaccaccgcacgc
ctgggcatccggacagaaaccggagacagcgaaggggctgtggtggaggaaaagccggtt
ccccagttcagtgaggatgaggtggaggccgtgctggcccggttccgtggcgacattcag
caggttccctccatgtactcggctctgaagcatcagggcaggccactgtacgaatacgcc
cgcgagggcatcgaaattgaacgcccggccaggccggtgaccatctacgagctcaaattg
ttggcggttcgggaacaggaactggatcttgcggttacctgtaccaagggtacgtatatc
cgctcactggttgaggatattggggaggttctgggctgcggtgctcatgtcagtgctctg
cgccgaacgctggcatccggttacaccctggcaaatgcccacgatgtcaaagacctggaa
gccatgcgtgagcgtggggaaagcctggatggcctgctgctgcctccggaaaccgctctc
accatgtttcccgagtaccgattgtccggcgtgccgctggtatcgatcttgaacggacaa
ccggttagaataccggatcagccctttgaaggtttcgtccgcctgtatggcgagcattcc
tttgtggggctggcagaagcattgccggaaggcgatggcactcaactggtgccgcgccgt
ctggtcaagaacagcaaacggtaa
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