Marinobacter sp. RI1: MspRI1_11040
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Entry
MspRI1_11040 CDS
T10737
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MspRI1_11040 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrx03019
]
MspRI1_11040 (pnp)
03016 Transfer RNA biogenesis [BR:
mrx03016
]
MspRI1_11040 (pnp)
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MspRI1_11040 (pnp)
Messenger RNA biogenesis [BR:
mrx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MspRI1_11040 (pnp)
Transfer RNA biogenesis [BR:
mrx03016
]
Prokaryotic type
tRNA degradation factors
MspRI1_11040 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
BFN13093
LinkDB
All DBs
Position
1259199..1261319
Genome browser
AA seq
706 aa
AA seq
DB search
MELQPRIKTFEMGGETFTLETGRIARQATGAVLVSTGDTSVLGTVVGAKEPKPGQGFFPL
TVNYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVVLTVMS
ASKNHDPDIAAMIAASAALAISGIPFDGPIGAARVGYTNEKGYFLNPTFEELSTSLLDMV
VAGTDEAVLMVESEAKGLTEDQMLGAVLFGHQEMQTAITAIKEFAAENGKPRWEWQPEAE
NTELLNAIKAEFGGAIEEAYAIRDKMARYERLGEIKSAAVEKLAGEEEGQPSEEEVKKYF
GKVEKSVVRLQVIEGKPRIDGRDNKTVRPIKVEVGVLPSVHGSALFTRGETQAIVTATLG
TTRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRMGSPGRREIGHGRLAKRGVAAVMPT
IEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEGDKFAV
LTDILGDEDHLGDMDFKVAGTKEGVTALQMDIKIQGITDEIMEIALEQANAARLHILDEM
NKVIAEPRAELSERAPSITTIKIHPDKIRDVIGKGGATIRGICDETGASIDLDDDGNVKI
YAADAAAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISER
RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQPTDFAD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggaactgcaaccacgtatcaagacatttgaaatgggtggggaaaccttcaccctggaa
accggtcgtattgcccgtcaggcaaccggcgcggtactggtaagcaccggcgacacttcc
gttctgggcaccgttgttggcgccaaagagcccaagccgggccagggcttcttccccctg
actgtgaactaccaggaaaaaacctacgccgccggtaaaattccgggcggctttttcaag
cgtgaaggtcgtccgtccgaaaaagagacgctgacctcccgcctgatcgaccgtccgatc
cgcccgctgttcccgaacggctacatgaacgaagttcaggttgtgctgacggttatgtct
gccagcaagaaccacgatccggatatcgctgccatgattgctgcttctgcagccctggcc
atctccggtatcccgttcgacggcccgattggtgctgcccgtgtgggttacaccaacgag
aaaggctacttcctgaacccgaccttcgaagagctcagcacttccctgctggacatggtt
gtggctggtaccgacgaagcggtgctgatggttgagtccgaggccaaaggcctgacagaa
gaccagatgctgggcgccgtactgttcggccaccaggaaatgcagactgcgatcactgcc
atcaaggaatttgctgccgagaacggtaagccgcgctgggaatggcagcccgaggcggaa
aacaccgagctgctgaacgccatcaaggccgagttcggtggtgccatcgaagaagcctac
gctatccgtgacaagatggcccgttacgagcgtctgggtgagatcaaatctgctgccgtt
gaaaaactggccggtgaagaagaaggccagccttccgaagaggaagtgaagaagtacttc
ggtaaggtcgagaagtctgtcgttcgtctgcaggttatcgaaggcaagccgcgtatcgat
ggccgtgacaacaagaccgttcgcccgatcaaggtggaagttggcgtactgccgtccgtt
cacggttccgccctgttcacccgtggtgagacccaggctatcgttaccgctacgctgggt
acgacccgtgacgtgcagataatcgatgccctggaaggtgagcgcaaggacccgttcctg
ttccactacaacttccctccgtactccgtaggtgaagctggccgtatgggcagcccgggc
cgtcgtgaaattggtcacggtcgtctggccaagcgtggtgtagccgcggttatgccgacc
atcgaagagttcccgtatgccattcgtgcggtttccgagatcactgaatccaacggttcc
agttccatggcttccgtgtgtggctcttccctggcgctgatggatgctggtgtgcctctg
aaggcgccggtggccggtatcgccatgggtctggtcaaggaaggcgacaagttcgcggtc
ctgactgatatcctgggtgacgaagatcacctgggtgacatggatttcaaggttgccggt
accaaagagggcgtcacggccctgcagatggacatcaaaattcagggtattaccgacgaa
atcatggaaatcgccctggagcaggccaacgctgcgcgtctgcacatcctggacgagatg
aacaaagtgatcgccgagccccgcgccgagctgtctgagcgcgctccgagcatcaccacc
atcaagatccatccggacaagatccgtgatgttatcggtaagggtggcgcgaccatccgt
ggtatctgtgacgagaccggtgcttccatcgacctggatgacgacggcaacgtgaaaatc
tacgccgctgatgccgccgccgctcaggctgctgtaaatcgggtcaaggaaatcactgcc
gagatcgaagtaggcgctatctacaagggccgcgttgagcgtattgtggacttcggtgcc
ttcgttaacatcctgcctggcaaggatggtctggtgcacatttcccagatctctgagcgc
cgtatcgagaacgtaactgacgagctgagcgaaggtcaggaagttctggtcaaggtgctg
gatgtggacaaccgtggtcgcgtcaagctgtccatgaaggaagtcaaagaaggcgagcag
ccgactgacttcgctgactaa
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