Marinobacter sp. RI1: MspRI1_16130
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Entry
MspRI1_16130 CDS
T10737
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mrx Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrx03009
]
MspRI1_16130 (rimO)
Enzymes [BR:
mrx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MspRI1_16130 (rimO)
Ribosome biogenesis [BR:
mrx03009
]
Prokaryotic type
ribosomal protein modification factors
MspRI1_16130 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
DUF5005
Matrix_Paramyxo_N
ATG27
Motif
Other DBs
NCBI-ProteinID:
BFN13602
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All DBs
Position
1795817..1797184
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AA seq
455 aa
AA seq
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MAPDILQAFMTEKTQNAPQSGKVGFISLGCPKALVDSERILTQLRLDGYDVVPTYDDADI
VVVNTCGFIDAAKQESLDAIGEAISENGRVIVTGCMGVEADRIRETHPGVLAVSGPHAYE
EVVGAVHQYVPPKKEHDPFVDLVPPQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL
VSRPIGEVMDEAKRLVDAGVKEILVISQDTSAYGVDIKYRTGFWQGRPVKTKMQALCEAL
GEMGVWVRLHYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPRVLKAMKRPAHDSKTLE
RIRKWREICPELTIRSTFIVGFPGETEEDFQYLLDWLDEAQLDRVGAFTYSAVEGAPANE
LKGAVPEDVKEDRLARFMAKQAEISAARLKAKIGKTIDVLIDEVDEEGAIGRSKADAPEI
DGMVYLNDETDLVPGQIVQAVVEHADEHDLWAVLV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctccggacatcctgcaggcttttatgaccgagaaaacgcaaaacgcgccccagagc
ggaaaagtaggctttatcagccttggttgcccgaaggcgctggtagattctgaacgtatc
ctgacccagttgcgcctggacggctacgatgtggtgcccacctacgacgacgccgatatt
gtggtggtgaacacctgtggttttatagatgccgccaagcaggaatccctggacgccatt
ggtgaggcaatcagtgagaatggcagggtcatcgtcaccggttgcatgggggttgaggcc
gaccggatccgtgaaacccatccgggcgtgctcgcagtgtccggtcctcatgcctacgag
gaagtggtcggcgccgtccaccagtatgtgccgccgaagaaagagcatgacccgtttgtg
gacctggtgccgcctcagggcgtcaaactgacaccacgacactatgcctacctgaagatc
tctgaaggctgtaatcaccgttgtaccttctgcattattccctcaatgcggggagacctt
gtcagtcgcccgattggcgaggtgatggacgaagccaaacggttggtggatgccggagtg
aaggagattctggtgatttcccaggatacctccgcctatggcgtcgacatcaaataccgc
accggtttctggcagggtcgcccggtgaaaaccaaaatgcaggcgttgtgtgaagcgctg
ggtgagatgggcgtgtgggtacgtttgcactatgtctatccctatccccatgtggacgac
atcattccgctaatggccgaaggcaagatcctgccgtacctggacatcccgttccagcac
gccagtccgagagtacttaaagccatgaagcgcccggcccatgacagcaagaccctggag
cgcatcaggaagtggcgggaaatctgcccggaactgaccattcgttccaccttcatcgtg
ggtttcccgggggaaaccgaggaagatttccagtacctcctggactggctggacgaggct
cagctggatcgagtcggcgccttcacttatagcgcggtggaaggggcgccggcgaacgag
ctcaaaggtgcggtccccgaggacgtgaaggaagatcgcctggctcgctttatggccaaa
caggcagaaatctcggctgcccgccttaaggcaaagattggcaagaccattgatgtgctg
attgatgaagtggacgaggaaggtgcgattggcagatcaaaagccgacgcgcctgagatt
gacgggatggtctacctgaacgacgaaaccgacctggttcccggtcagatcgttcaggcc
gtggttgagcatgccgacgagcatgatctctgggcggttctggtttga
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