Marinobacter sp. RI1: MspRI1_18810
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Entry
MspRI1_18810 CDS
T10737
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03030
DNA replication
mrx03430
Mismatch repair
mrx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MspRI1_18810
03430 Mismatch repair
MspRI1_18810
03440 Homologous recombination
MspRI1_18810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrx03032
]
MspRI1_18810
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_18810
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MspRI1_18810
DNA replication proteins [BR:
mrx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MspRI1_18810
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MspRI1_18810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Imm61
Motif
Other DBs
NCBI-ProteinID:
BFN13870
LinkDB
All DBs
Position
complement(2114704..2115411)
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AA seq
235 aa
AA seq
DB search
MLEYIKQWLARRRGGTVGDHDAANLPSPKTVGDQPLSRSRLIVLDLETTGLNASKDEVIA
IGAVAIEGGVIHLNDQFDLILRRPELDIRETVLIHGIGPEALTQGYETQDALLYLLEWMN
GDPILAYHSAFDQKFLEKTLKSQLGYTLPHVWMDVAELMPAFFPKATIKGRGLDDWADVF
GLEISERHHAAADALVTAELALIALNKARKNDVKTLKELSEKLHYQRRLQHMHRY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatacatcaaacagtggctggccagaagacgcggcggaacagtcggcgatcac
gatgccgccaatctgcccagcccgaaaacggttggcgaccagcccttgtcccggagccgg
ctgattgttcttgaccttgagaccaccggcctgaacgcgtccaaagatgaagtgattgcc
atcggagcggttgccatcgaaggtggtgtcatccacctcaatgaccagtttgacctgata
ctgcgtcgccctgaactggacattcgggaaaccgtgctgatccatggcatcggcccagaa
gccctgactcagggctacgaaacccaggatgcactgctctaccttctggaatggatgaac
ggcgacccgatacttgcctaccactccgccttcgaccagaagttcctcgaaaagacgctg
aaaagccagttgggctacaccctgccccacgtctggatggatgttgccgagctgatgccg
gcgttcttcccgaaagcaacgatcaaagggcgcggcctggacgactgggcggatgtattt
ggcctggaaatcagtgaacgccatcacgccgcagccgacgcgctggttaccgcagaactg
gcactgatagccctcaataaagcccggaaaaacgacgtcaaaactctcaaagaactcagt
gaaaagctgcattatcaacgccgtttacagcatatgcaccgctattag
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