Marinobacter sp. RI1: MspRI1_19490
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Entry
MspRI1_19490 CDS
T10737
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mrx Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrx03009
]
MspRI1_19490 (dbpA)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MspRI1_19490 (dbpA)
Ribosome biogenesis [BR:
mrx03009
]
Prokaryotic type
rRNA helicases
MspRI1_19490 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
AAA_19
CMS1
Flavi_DEAD
SBF_like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BFN13938
LinkDB
All DBs
Position
2187254..2188627
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AA seq
457 aa
AA seq
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MSSFKALGLSAAMQANLDQLGYQQPTPVQAEAVPLALAGKDVIAMAQTGSGKTAAFGIPI
IEAIDPRRFRVQSLVLCPTRELADQVAKALRELARAKDNVKVLTLCGGVPIGPQIGSLSH
GAHIVVGTPGRVDDHLRKGTLSLDGLKVLVLDEADRMLDMGFEEVVTSIVSQAPGSRQTL
LFSATWPPAIRKLSEQFQSKPEDVRVESKAAAITIEESFYEIQPDQRAAAVAALLSRFQP
VSSLVFCTTKRDCDELSDELGRLGFSALSLHGDLDQRERDSALVRFANQSCTVLVATDVA
ARGLDIKGLPLVINAEPARDPEVHTHRVGRTGRAGEQGHAVTLCTPRQGHKITRLETERG
EPVLWGDTEALLAEALRPVTPAMKTLCLAGGRKDKVRPGDVMGALTGEAGIPGAAVGKID
LFDFQCFVAVESRWAAQALARLEKGKVKGRKFRVRYA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttttaaagcgcttggtctttctgcggccatgcaggccaaccttgatcaattg
ggttaccagcaacccacgccggttcaggcagaggcagttccgcttgcgttggcgggcaag
gacgtgattgccatggcgcaaaccggcagcggcaagacagcagcgttcgggataccgatt
atcgaggccatcgatccgcgacgcttccgggttcagagtcttgttctttgtcccacccgg
gaactggcggatcaggtggccaaagcgttgcgagagttggcacgggccaaagataacgtg
aaggtgctgacgttgtgtggtggtgtgcctatcggcccccagatcgggtcgctcagccat
ggcgctcatatcgtcgtgggtacccctggccgggtagatgaccacctgcgcaaaggtacg
ctttcgctggatggcttgaaagtgctggtgctggacgaggcggaccgtatgctggatatg
gggttcgaggaggtggtcaccagcattgtctcccaagcccccggtagcaggcagacgctg
ctgttctccgccacctggccgccggccatcagaaagctgagcgagcaattccagagcaag
ccggaagacgtgcgggtggaatcaaaagcggccgccatcaccattgaagaatccttttac
gaaatccagccggatcagcgggcggcggccgtggcagcactgctttcccgttttcagccg
gtgtcgtctctggtgttctgtaccaccaaacgggactgtgatgagctgtcggatgaactg
ggtcgtctcggcttttcggcgttgtcgctacatggcgatctggaccagcgcgaacgggac
agcgctctggttcgatttgccaaccagagttgtacggttctggtggctaccgatgtggcg
gcaagggggctcgacatcaaagggctaccactggtcatcaatgccgagcctgcgcgggat
cccgaggtgcatacccatcgggtgggccgtaccggccgggcaggcgagcaggggcatgcg
gttactctctgcactccgcgccagggccacaagattacacgcctggaaacggagcggggc
gagccggtgttgtggggcgataccgaagcgttgctggcggaggcgttgcgcccggttaca
ccggccatgaaaacgctgtgcctggctggcggtcgcaaagacaaagtgcgccctggcgac
gtgatgggagctcttaccggcgaggccggtattcccggcgctgccgttggcaaaatcgat
ctgttcgactttcagtgcttcgtggcggttgaatcccgatgggcggcccaggcgctggcg
cggctggagaaaggtaaggtgaaaggtcggaaattccgggttagatatgcatga
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