Marinobacter sp. RI1: MspRI1_20450
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Entry
MspRI1_20450 CDS
T10737
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx00061
Fatty acid biosynthesis
mrx00071
Fatty acid degradation
mrx01100
Metabolic pathways
mrx01212
Fatty acid metabolism
mrx02024
Quorum sensing
mrx04146
Peroxisome
Module
mrx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MspRI1_20450
00071 Fatty acid degradation
MspRI1_20450
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MspRI1_20450
09145 Cellular community - prokaryotes
02024 Quorum sensing
MspRI1_20450
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mrx01004
]
MspRI1_20450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrx04147
]
MspRI1_20450
Enzymes [BR:
mrx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MspRI1_20450
Lipid biosynthesis proteins [BR:
mrx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MspRI1_20450
Exosome [BR:
mrx04147
]
Exosomal proteins
Exosomal proteins of breast milk
MspRI1_20450
Exosomal proteins of breast cancer cells
MspRI1_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BFN14034
LinkDB
All DBs
Position
2288028..2289695
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AA seq
555 aa
AA seq
DB search
MDTTKKLPLDMVYHWEATSPNSLYMTQPIGDGKVVEYTWGRAVDEARRMAAYLKSLNLPE
KSRIGLISKNCAQWVMTDWAIWMAGHISVPLYPTLNADTVNYILNHAECDVLFVGKLDDW
DSMKSGVPESVRCISYPLSPPNDFETWDDIVAKYPPLEGKTRRDPEELATIVYTSGSTGR
PKGVMLSFNNMAFAAVGGIETLGVGPGERMLSYLPLAHVFERTFVELGSLYSGFQLYFAE
SLDTFVQDLQRARPTLFLSVPRLWVKFQHGVLQKVPKQKLDRLLKIPVVSKLIKKKVLKG
LGLDKVKLAGSGSAPLSNDVLDWYRNLGLELLEGYGMSENFAYSHMNKPGRTRTGYVGEA
LPGVEVKISEQGEVLVKSPATMMGYYKDEEKTAEAFTEDGFLRTGDKGEIDEMGRLKLTG
RIKEIFKTSKGKYIAPAPIENRLMSHDAIEMVCVSGANQTQPHALVVLGEEIRPKAADES
FRKELEESFRQLIQDVNKTVDPHEQLAFITVVSDEWSIENSFLTPTLKLKRNVVEDAYQA
KVDSWYAKKQPVIWQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggacacaacgaaaaagctccccctggatatggtctaccactgggaggccaccagccct
aattccctttatatgacgcagcccattggcgacggtaaggtggttgagtacacctggggc
cgtgccgtggatgaggcacgccggatggcggcgtacctgaaatccctgaacctgccggag
aaaagccggattggtctgatttccaagaactgcgcccagtgggtaatgacagactgggcc
atctggatggccgggcacatttccgtgccgctgtatcccaccctgaacgccgataccgtg
aactacatcctcaaccacgccgagtgcgacgtgttgttcgtgggtaaactggatgactgg
gacagtatgaaatccggtgtgccggaatcggttcgctgcatttcctatccgctgagcccg
cccaacgatttcgagacctgggacgacattgttgccaagtacccgccactggaaggcaaa
accaggcgtgatccggaagagctggccaccatcgtgtatacctctggcagtaccggtcga
ccgaaaggcgttatgctcagcttcaataacatggcgttcgccgctgttggcggtatcgag
actctgggcgtagggccaggtgagcgcatgttgtcctacctgccgctggctcatgtattt
gagcgcacctttgtggagctgggctctttgtattccggcttccagctttattttgcagag
tctctggacaccttcgttcaggatcttcagcgggcacggccaacgctcttcctctcggtt
ccgcgcctgtgggtgaagttccagcatggtgttttgcagaaagtgcccaagcagaagctg
gatcgcctgctgaagattccggtagtgagcaagctgatcaagaagaaggtgctgaaaggc
ctgggcctggacaaggtgaagctggccggttccggttccgcaccgttgtccaacgatgta
ttggactggtaccgcaatctcggcctggaactgctggaaggttatggcatgtccgagaac
tttgcctactctcacatgaacaaaccgggccgtacccgtaccggttatgtcggtgaagcc
ctgccgggtgttgaggtgaagatcagcgaacagggagaggtattggtcaagagccccgct
accatgatggggtattacaaggacgaggagaaaaccgctgaagctttcaccgaggacggc
ttcctgcgtacgggtgacaagggcgagattgacgagatgggccgcctcaagctgaccggc
cgaatcaaggagatcttcaagaccagcaagggcaagtacattgcgccggcgccgatcgag
aatcgcctgatgtctcacgatgctatcgaaatggtgtgtgtgtctggtgccaaccagacc
cagccccacgcgttggtggttctgggtgaggagattcgcccgaaagctgctgacgagagc
ttccgcaaggagttggaagaaagcttcaggcagctgattcaggacgtaaacaaaactgta
gatccccacgaacagttggctttcattacggtggtcagcgatgagtggtccatcgagaac
agcttcctgacgccgacgctcaagcttaagcgtaacgtggtggaagacgcctatcaggcg
aaagtggacagctggtacgccaagaagcagccggttatctggcagtaa
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