KEGG   Marinobacter sp. RI1: MspRI1_21160
Entry
MspRI1_21160      CDS       T10737                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mrx  Marinobacter sp. RI1
Pathway
mrx00010  Glycolysis / Gluconeogenesis
mrx00020  Citrate cycle (TCA cycle)
mrx00260  Glycine, serine and threonine metabolism
mrx00280  Valine, leucine and isoleucine degradation
mrx00310  Lysine degradation
mrx00380  Tryptophan metabolism
mrx00620  Pyruvate metabolism
mrx00630  Glyoxylate and dicarboxylate metabolism
mrx00640  Propanoate metabolism
mrx00670  One carbon pool by folate
mrx00785  Lipoic acid metabolism
mrx01100  Metabolic pathways
mrx01110  Biosynthesis of secondary metabolites
mrx01120  Microbial metabolism in diverse environments
mrx01200  Carbon metabolism
mrx01210  2-Oxocarboxylic acid metabolism
mrx01240  Biosynthesis of cofactors
Module
mrx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mrx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrx_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mrx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:mrx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MspRI1_21160 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MspRI1_21160 (lpdA)
   00620 Pyruvate metabolism
    MspRI1_21160 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MspRI1_21160 (lpdA)
   00640 Propanoate metabolism
    MspRI1_21160 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MspRI1_21160 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MspRI1_21160 (lpdA)
   00310 Lysine degradation
    MspRI1_21160 (lpdA)
   00380 Tryptophan metabolism
    MspRI1_21160 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MspRI1_21160 (lpdA)
   00670 One carbon pool by folate
    MspRI1_21160 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mrx04147]
    MspRI1_21160 (lpdA)
Enzymes [BR:mrx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MspRI1_21160 (lpdA)
Exosome [BR:mrx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MspRI1_21160 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 DAO FAD_oxidored FAD_binding_3 HI0933_like 3HCDH_N Lys_Orn_oxgnase AlaDh_PNT_C NAD_binding_8 Thi4 UDPG_MGDP_dh_N 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: BFN14105
LinkDB
Position
2365657..2367099
AA seq 480 aa
MSDKFDVIVIGAGPGGYVAAIKAAQLGLKTACVESWTGKDGKSQVLGGTCLNVGCIPSKA
LLEVTHKFEEASHDYDSMGILAKDVKIDVAKMMERKAGIVKQLTGGIAGLFKANGVTSIH
GHGKLLAGRKVEVTDKDGKTKTYEADNVIIATGSRPIEIPPAPFDGEYIVDSEGALEFTE
VPKRLGVIGAGVIGLELGSVWARLGSEVTVIEAQDSFLPAVDQQCAKDALKQFQKQGLNI
VMGARMTGAEVKRKLVNVSYEDSKGKQDAKFDKLIVAVGRRPYTDGALAEDSGVTMDERG
FIFVDDNCKTEAPGVWAIGDVVRGPMLAHKASEEGVMVAERIAGHKPQVNYDCIPNVIYT
FPEVAWVGKTEEQLKAEGEEYNVGTFPFAANGRAMAANAASGMVKIIADAKTDRILGFHV
VGPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAVAGGAIHVANRRKKK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtccgataagttcgacgttattgtcattggtgcaggccccggtggttacgttgctgcc
attaaagccgctcagctgggtctcaagaccgcctgtgtagagtcctggactggtaaagac
ggcaagagccaggtgctcggtggcacctgtctgaacgtaggctgtatcccgtccaaggcc
ctgctggaagtgactcacaagtttgaggaagccagccacgattacgattccatgggcatc
ctggccaaggacgtgaaaatcgacgttgccaagatgatggagcgcaaggctggtatcgtt
aagcagctgaccggtggcattgctggcctgttcaaggccaatggcgtcacctcgatccac
ggccacggcaagctgttggccggtcgtaaggtggaagtcaccgacaaggatggcaaaacc
aagacctatgaagccgacaacgtgatcatcgccaccggttcccggccgatcgagattccg
ccggcgccgttcgacggtgagtacatcgtcgattccgagggtgcgctggagtttaccgaa
gttcccaagcgtcttggtgtgatcggtgccggtgttattggtctggagctgggtagcgtc
tgggcccgcctgggttcagaagtaaccgtgatcgaagcgcaggacagtttcctgccggcg
gttgaccagcagtgtgccaaggatgcgttgaagcagttccagaagcagggcctgaacatc
gtgatgggcgcccgcatgactggcgcggaagtcaagcgcaagctggttaacgtcagctac
gaagactccaagggtaagcaagacgccaagtttgacaagctgatcgtggctgttggccgt
cgtccgtacaccgatggtgcactggctgaagactccggcgtgaccatggatgagcggggc
tttattttcgtagacgacaactgcaagaccgaagcaccgggtgtctgggccatcggtgat
gtggttcgtggtccaatgctggcccacaaagcgtctgaagagggcgtgatggttgctgag
cgtattgccgggcataagcctcaggtcaattacgactgcatcccgaatgtcatctacacc
ttccctgaggttgcctgggtcggcaagaccgaagagcagctgaaagctgaaggcgaagaa
tacaacgtcggaaccttcccgtttgcggcgaatggtcgtgccatggcagccaatgcggct
tccggtatggtcaagatcatcgcagatgcgaagaccgaccgtattcttggcttccacgta
gtgggtccgcaggcgtctgaaatcgttgcccagggcgtgatcgccatggaattcggttcc
agtgcagaagatctggctctgacctgtttcgcgcacccgactctgtccgagtctgtgcac
gaagcggccctggccgttgctggcggtgcgattcacgtcgccaaccgtcgcaagaagaag
taa

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