Marinobacter sp. RI1: MspRI1_21160
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Entry
MspRI1_21160 CDS
T10737
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx00010
Glycolysis / Gluconeogenesis
mrx00020
Citrate cycle (TCA cycle)
mrx00260
Glycine, serine and threonine metabolism
mrx00280
Valine, leucine and isoleucine degradation
mrx00310
Lysine degradation
mrx00380
Tryptophan metabolism
mrx00620
Pyruvate metabolism
mrx00630
Glyoxylate and dicarboxylate metabolism
mrx00640
Propanoate metabolism
mrx00670
One carbon pool by folate
mrx00785
Lipoic acid metabolism
mrx01100
Metabolic pathways
mrx01110
Biosynthesis of secondary metabolites
mrx01120
Microbial metabolism in diverse environments
mrx01200
Carbon metabolism
mrx01210
2-Oxocarboxylic acid metabolism
mrx01240
Biosynthesis of cofactors
Module
mrx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrx_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mrx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MspRI1_21160 (lpdA)
00020 Citrate cycle (TCA cycle)
MspRI1_21160 (lpdA)
00620 Pyruvate metabolism
MspRI1_21160 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
MspRI1_21160 (lpdA)
00640 Propanoate metabolism
MspRI1_21160 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MspRI1_21160 (lpdA)
00280 Valine, leucine and isoleucine degradation
MspRI1_21160 (lpdA)
00310 Lysine degradation
MspRI1_21160 (lpdA)
00380 Tryptophan metabolism
MspRI1_21160 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MspRI1_21160 (lpdA)
00670 One carbon pool by folate
MspRI1_21160 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrx04147
]
MspRI1_21160 (lpdA)
Enzymes [BR:
mrx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MspRI1_21160 (lpdA)
Exosome [BR:
mrx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MspRI1_21160 (lpdA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
DAO
FAD_oxidored
FAD_binding_3
HI0933_like
3HCDH_N
Lys_Orn_oxgnase
AlaDh_PNT_C
NAD_binding_8
Thi4
UDPG_MGDP_dh_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BFN14105
LinkDB
All DBs
Position
2365657..2367099
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AA seq
480 aa
AA seq
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MSDKFDVIVIGAGPGGYVAAIKAAQLGLKTACVESWTGKDGKSQVLGGTCLNVGCIPSKA
LLEVTHKFEEASHDYDSMGILAKDVKIDVAKMMERKAGIVKQLTGGIAGLFKANGVTSIH
GHGKLLAGRKVEVTDKDGKTKTYEADNVIIATGSRPIEIPPAPFDGEYIVDSEGALEFTE
VPKRLGVIGAGVIGLELGSVWARLGSEVTVIEAQDSFLPAVDQQCAKDALKQFQKQGLNI
VMGARMTGAEVKRKLVNVSYEDSKGKQDAKFDKLIVAVGRRPYTDGALAEDSGVTMDERG
FIFVDDNCKTEAPGVWAIGDVVRGPMLAHKASEEGVMVAERIAGHKPQVNYDCIPNVIYT
FPEVAWVGKTEEQLKAEGEEYNVGTFPFAANGRAMAANAASGMVKIIADAKTDRILGFHV
VGPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAVAGGAIHVANRRKKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataagttcgacgttattgtcattggtgcaggccccggtggttacgttgctgcc
attaaagccgctcagctgggtctcaagaccgcctgtgtagagtcctggactggtaaagac
ggcaagagccaggtgctcggtggcacctgtctgaacgtaggctgtatcccgtccaaggcc
ctgctggaagtgactcacaagtttgaggaagccagccacgattacgattccatgggcatc
ctggccaaggacgtgaaaatcgacgttgccaagatgatggagcgcaaggctggtatcgtt
aagcagctgaccggtggcattgctggcctgttcaaggccaatggcgtcacctcgatccac
ggccacggcaagctgttggccggtcgtaaggtggaagtcaccgacaaggatggcaaaacc
aagacctatgaagccgacaacgtgatcatcgccaccggttcccggccgatcgagattccg
ccggcgccgttcgacggtgagtacatcgtcgattccgagggtgcgctggagtttaccgaa
gttcccaagcgtcttggtgtgatcggtgccggtgttattggtctggagctgggtagcgtc
tgggcccgcctgggttcagaagtaaccgtgatcgaagcgcaggacagtttcctgccggcg
gttgaccagcagtgtgccaaggatgcgttgaagcagttccagaagcagggcctgaacatc
gtgatgggcgcccgcatgactggcgcggaagtcaagcgcaagctggttaacgtcagctac
gaagactccaagggtaagcaagacgccaagtttgacaagctgatcgtggctgttggccgt
cgtccgtacaccgatggtgcactggctgaagactccggcgtgaccatggatgagcggggc
tttattttcgtagacgacaactgcaagaccgaagcaccgggtgtctgggccatcggtgat
gtggttcgtggtccaatgctggcccacaaagcgtctgaagagggcgtgatggttgctgag
cgtattgccgggcataagcctcaggtcaattacgactgcatcccgaatgtcatctacacc
ttccctgaggttgcctgggtcggcaagaccgaagagcagctgaaagctgaaggcgaagaa
tacaacgtcggaaccttcccgtttgcggcgaatggtcgtgccatggcagccaatgcggct
tccggtatggtcaagatcatcgcagatgcgaagaccgaccgtattcttggcttccacgta
gtgggtccgcaggcgtctgaaatcgttgcccagggcgtgatcgccatggaattcggttcc
agtgcagaagatctggctctgacctgtttcgcgcacccgactctgtccgagtctgtgcac
gaagcggccctggccgttgctggcggtgcgattcacgtcgccaaccgtcgcaagaagaag
taa
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