Marinobacter sp. RI1: MspRI1_22630
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Entry
MspRI1_22630 CDS
T10737
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MspRI1_22630 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrx03019
]
MspRI1_22630 (recQ)
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_22630 (recQ)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MspRI1_22630 (recQ)
Messenger RNA biogenesis [BR:
mrx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MspRI1_22630 (recQ)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MspRI1_22630 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
BFN14252
LinkDB
All DBs
Position
2525917..2527794
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AA seq
625 aa
AA seq
DB search
MYMDQDFDQLATEPPTAAGRNPEQVLHEVFGYESFRPLQGDIVREVVNGGDALVLMPTGG
GKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVRAAFLNSTMDFEQARATEYAL
ATGELDLLYCAPERLIQPRTIELLHNASLSLFAIDEAHCVSQWGHDFRSDYLQLSMLAQE
FPGIPRIALTATADERTRKEIAERLSLTNARHFISGFDRPNIQYRITPKTNANKQLLDFI
KAEHEGDCGIVYCLSRNKVDATARLLSSKGYTALPYHAGLSAEDRARNQERFLREDGVIV
VATIAFGMGIDKPDVRFVAHMDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQ
MLEASQGNDQFKRVERQKLDAMLGLCEVTQCRRQVLLHYFGDNLETPCGNCDTCLNPPET
WDGTVAVQKALSCVYRTGQRFGVNYVIDVLRGSENERILQSGHQAITTYGIGQELSANEW
KSVFRQLVANGYLRADPEGYGALQLTERCRPLLKGAQAIELRKDPVVRNTAGGKSSTSRR
SGQNVRDQITDHAGWDALRACRKELADKQGVPPYVIFHDTTLFDMLERRPSTLEELAEVS
GVGAAKLEKYGDVFLQALRSINPEA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggaccaggacttcgaccaactcgccactgaaccacccaccgctgcgggccga
aatccggagcaggttctgcacgaggtctttggttacgagagttttcggcccctgcagggg
gatattgtccgggaagtggtcaacggcggtgatgcccttgtgttgatgcccaccgggggc
ggtaaatccctgtgttaccaggtgcccgctctggtccggcccggcaccgccattgtgatc
tcaccgctgatcgcgcttatgcaggatcaggtggcggcgctacgcgagcttggagtgaga
gcggcgttcctgaattccaccatggatttcgaacaggcccgtgccaccgaatacgccctg
gcgaccggcgagctggacctgctctattgcgcgccggaacggctgattcagccgcgaacc
attgagctgctgcataacgcgtccctgtcgttgtttgccatagacgaggctcactgcgtc
tcccagtgggggcacgatttccggtccgactaccttcaactgagcatgctggcccaggaa
tttcccggcatcccccgtatcgcactgacagcgaccgctgatgagcgcacgcgaaaagag
attgctgaacggctgtcgctgacaaacgcccggcatttcatcagtggctttgatcgcccg
aacattcagtatcggattacaccaaagaccaacgcaaacaaacagttgttggattttatt
aaagcagagcatgaaggtgattgcggtattgtctattgcttgtcccgaaacaaggtcgat
gccaccgcccgattactgagcagcaagggctataccgcactgccctaccatgccgggctg
agcgccgaagaccgcgcccgcaatcaggagcgctttctcagggaagacggcgttattgtg
gtggcaaccattgcctttggcatgggcatcgataaacctgatgtgcgttttgtcgcccat
atggaccttcccaaaagcctggaagcctattaccaggaaacgggccgggcgggccgggat
ggcaagccgtccaccgcgtggatggtgtatggcctgcaggatgtcatcaaactccggcag
atgctggaggcctctcagggtaacgatcagttcaagcgggttgagcgacagaaactggat
gccatgcttgggctgtgcgaagtgacccagtgccggcgacaagttttgttgcattatttc
ggagacaatctggagactccctgcggaaactgcgatacctgcctgaaccctccggaaacc
tgggatggcacggtggcggtgcagaaggccctctcctgcgtgtaccgcaccggccagcgt
tttggcgttaactacgtcattgatgtacttcgcgggtcagagaatgaacgaatcctgcaa
tccggccaccaggcgatcaccacctatggcatcggtcaggaactgtcagcgaacgaatgg
aagtcggtattccggcaactggtggcgaacggatacctgcgggcagaccctgagggctat
ggcgcgcttcagctaaccgagcgctgccgccccctgctcaagggcgcacaggcgattgaa
ctccggaaagacccggtggtccgcaacaccgctggtggtaagtcatcaacgagccgccgt
agcggccagaacgtgcgggaccagattaccgaccacgccgggtgggatgcgttgcgggcc
tgccgcaaagagctggcggacaagcagggcgtgccgccctacgtgatcttccacgacaca
accctgttcgacatgcttgaacgccgcccttccaccctggaggagctggccgaggtcagc
ggcgtgggcgccgccaagctggaaaagtatggcgatgttttcctgcaggcgctacgctct
atcaatcctgaggcttga
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