Marinobacter sp. RI1: MspRI1_23130
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Entry
MspRI1_23130 CDS
T10737
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MspRI1_23130 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_23130 (xthA)
Enzymes [BR:
mrx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MspRI1_23130 (xthA)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MspRI1_23130 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
BFN14302
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All DBs
Position
2573983..2574795
Genome browser
AA seq
270 aa
AA seq
DB search
MMFVSFNVNSIRTRLHQLKAVIQQLNPDVIGLQETKVTDEEFPVGAIRELGYHVHFHGQK
THYGVALLSRAEPEEVLKGYPSDGEDSQRRLITGHFTVNGEPLTVINGYFPQGESRDHPV
KFPAKEKFYADLMAYLDELAKKPGHIMVMGDMNISPTDRDIGIGADNAKRWLRSGKCSFL
PEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRIDLIMASDSLL
PKAKAAGVSYDIRAMERPSDHCPVWASFDL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgtgtcgttcaatgtgaacagtatccgcacccgcctgcatcagctcaaagcc
gtgattcagcagcttaatccggatgtcatcggtcttcaggaaaccaaggtcactgatgag
gaattcccggtcggggccattcgcgagctcggttatcacgttcactttcatggccagaaa
acccactacggtgttgccctgttatcccgcgcggagccggaagaggttctcaaaggctac
ccctccgatggtgaagactcccagcggcgcctgattaccggccatttcaccgttaacggc
gagcccctgaccgtcatcaacggttatttcccccagggggaaagccgggaccaccctgta
aagtttcctgccaaggaaaagttctacgccgacctgatggcctacctggacgaattggcc
aagaaacccggccatattatggtaatgggcgacatgaacatatcgcccacagaccgcgac
atcggcattggcgccgacaatgcaaaacgctggttgcgttcgggaaaatgcagtttcctg
ccggaagagcgggaatggcttgggcaggttgaacaacggggctttaccgatgtattccgc
catctgcacccggacgaagccaacaccttcagctggtttgactatcgcagcaaaggcttt
gagcgtgacccgaggcgaggcctgcgcattgacctgatcatggccagtgacagcctcctg
cccaaggcaaaagcagcaggagtgtcctacgatatccgggccatggagcgaccatccgat
cactgcccggtgtgggcctcattcgacctctga
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