Marinobacter sp. RI1: MspRI1_23390
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Entry
MspRI1_23390 CDS
T10737
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03030
DNA replication
mrx03430
Mismatch repair
mrx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MspRI1_23390 (dnaQ)
03430 Mismatch repair
MspRI1_23390 (dnaQ)
03440 Homologous recombination
MspRI1_23390 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrx03032
]
MspRI1_23390 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mrx03400
]
MspRI1_23390 (dnaQ)
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MspRI1_23390 (dnaQ)
DNA replication proteins [BR:
mrx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MspRI1_23390 (dnaQ)
DNA repair and recombination proteins [BR:
mrx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MspRI1_23390 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BFN14328
LinkDB
All DBs
Position
complement(2596607..2597317)
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AA seq
236 aa
AA seq
DB search
MRQIVLDTETTGIDPNEGHRIIEIGCVEVIERELTGRNYHVYINPEREVEAEAITVHGIT
NEFLADKPKFAEVADEFFEFIKGAELVIHNAAFDVGFMDSEFARLKPVRKTADHCGIVDS
LAIARKKHPGQKNNLDALCKRYGVDNSNRDLHGALLDAEILADVYLLMTGGQTALSLDAG
SGDEGGDGGIRRISGERAPLAVVRATSDEASAHDEFMAMMEKQAGETVWSRLQATE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatcgtactggataccgaaaccacgggtattgatccgaacgaaggtcaccgc
attatcgaaattggttgtgtggaagtgatcgaacgcgagctgaccggtcgcaactaccac
gtatacattaaccctgagcgggaggtagaagcggaggctatcaccgttcacggtatcacc
aatgaatttctggccgacaagccaaagtttgcggaggttgccgacgagttctttgagttc
atcaagggtgcagagctggtcatccataacgccgcgttcgacgtgggcttcatggactcc
gaattcgcccgtctgaaaccggttcgaaaaacagcagaccattgcggcattgtcgattca
ctggccattgccaggaaaaagcacccgggccagaaaaacaatctcgacgccctgtgcaag
cgttatggagtggataactccaaccgtgaccttcacggggcattgctggacgccgagatc
ctggcagacgtctatctgctgatgaccggcggccagaccgcgctttccctggatgccggc
tccggcgatgaaggtggcgatggcggtattcgccgaatctccggtgagcgcgcgccgttg
gcggtggttcgggccaccagtgatgaagcctctgcccatgatgagttcatggcgatgatg
gagaagcaggccggcgaaacggtgtggtcccggttgcaggcaacagaatga
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