Marinobacter sp. RI1: MspRI1_25190
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Entry
MspRI1_25190 CDS
T10737
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx00541
Biosynthesis of various nucleotide sugars
mrx01100
Metabolic pathways
mrx01250
Biosynthesis of nucleotide sugars
Module
mrx_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MspRI1_25190 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mrx01005
]
MspRI1_25190 (kdsB)
Enzymes [BR:
mrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
MspRI1_25190 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
mrx01005
]
Lipid A
MspRI1_25190 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
DUF2064
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BFN14508
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Position
complement(2801923..2802708)
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AA seq
261 aa
AA seq
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MSFTVVIPARYASSRLPGKPLAMIAGKPMIQHVCERANESRASRVVVATDDARIEEACLG
FGAEVIMTSPHHASGTDRLEEVARKLQLDPDHRVVNVQGDEPLIPPELINQVADNLEQYQ
EAAIATLCERIHDARQVFNPNVVKVVFDARGMAHYFSRAPIPWARDFWPAGAATQDVDLP
DGIGYFRHIGIYGYRASVLSEFVTWLPAPTERVESLEQLRALYNGALIHVDVADRPPAPG
VDTEEDLARLRALMEKGGSHG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaccgttgtcattcccgcccgatacgcttccagccgtttgcccggcaaacct
ctggccatgattgccggcaagcccatgatccagcatgtctgcgagcgggcgaatgagagc
cgcgccagccgcgtggtggtcgcgaccgacgatgcccgtatcgaggaggcgtgtcttggt
tttggtgccgaagtcatcatgacctcgccccatcatgccagtggcacagaccgccttgag
gaagtggcaaggaagctgcagctggatccggatcatcgcgtggtcaacgttcagggggac
gagcctctgataccgcctgaattgattaatcaggttgccgataaccttgaacagtaccag
gaggccgccatcgcaacactgtgcgagcggattcacgatgcccgccaggtgttcaacccc
aatgtcgtaaaagtggtgttcgatgcccggggcatggctcattatttcagtcgggctccg
attccctgggccagggacttctggccagcgggggcggccacccaggatgtggaccttccg
gatggcataggctatttcaggcacattggcatttatggttatcgtgccagtgtgctcagt
gagtttgttacctggctgccggcccccaccgaacgggtggaatccctggaacagttgcga
gcactctataatggcgctcttattcatgtggatgtggcggaccggccaccggctccgggg
gtagataccgaagaggatctggcccgtctgcgggcgctgatggaaaaagggggttcccat
ggctga
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