KEGG   Marinobacter sp. RI1: MspRI1_26180
Entry
MspRI1_26180      CDS       T10737                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
mrx  Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:mrx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrx03032]
    MspRI1_26180 (hupB)
   03036 Chromosome and associated proteins [BR:mrx03036]
    MspRI1_26180 (hupB)
   03400 DNA repair and recombination proteins [BR:mrx03400]
    MspRI1_26180 (hupB)
DNA replication proteins [BR:mrx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MspRI1_26180 (hupB)
Chromosome and associated proteins [BR:mrx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MspRI1_26180 (hupB)
DNA repair and recombination proteins [BR:mrx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MspRI1_26180 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg
Other DBs
NCBI-ProteinID: BFN14607
LinkDB
Position
complement(2906923..2907195)
AA seq 90 aa
MNKSELIDAIAESADISKAAAGRALDAMTNSITGALKKGDQVTLIGFGTFSVKERAARTG
RNPQTGAEIKIPASKVPGFKAGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtccgaactgatcgatgcaattgcagagtccgcagacatctccaaagccgca
gctggccgtgcgctggatgccatgaccaactcaatcaccggtgcactgaagaaaggcgac
caggttaccctgatcggctttggcaccttctctgtgaaagagcgtgctgcccgtactggt
cgcaacccgcagactggtgcagaaatcaagattccggcctctaaagtgcctggattcaag
gcaggcaaggccctgaaagacgccgttaagtaa

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