Marinobacter sp. RI1: MspRI1_28090
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Entry
MspRI1_28090 CDS
T10737
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mrx Marinobacter sp. RI1
Pathway
mrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MspRI1_28090 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrx03019
]
MspRI1_28090 (groL)
03110 Chaperones and folding catalysts [BR:
mrx03110
]
MspRI1_28090 (groL)
03029 Mitochondrial biogenesis [BR:
mrx03029
]
MspRI1_28090 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrx04147
]
MspRI1_28090 (groL)
Enzymes [BR:
mrx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MspRI1_28090 (groL)
Messenger RNA biogenesis [BR:
mrx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MspRI1_28090 (groL)
Chaperones and folding catalysts [BR:
mrx03110
]
Heat shock proteins
HSP60 / Chaperonin
MspRI1_28090 (groL)
Mitochondrial biogenesis [BR:
mrx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MspRI1_28090 (groL)
Exosome [BR:
mrx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MspRI1_28090 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MspRI1_28090 (groL)
Exosomal proteins of breast cancer cells
MspRI1_28090 (groL)
Exosomal proteins of colorectal cancer cells
MspRI1_28090 (groL)
Exosomal proteins of bladder cancer cells
MspRI1_28090 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
BFN14798
LinkDB
All DBs
Position
complement(3115111..3116763)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGDSARKRMVAGVNILADAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQANETAGDGTTTATVLAQSIVNEGIKAVTAGMNPMDLKRGI
DKGTAEAVKAIREMAKPCDDSRMIAQVGTISANGDETIGKIIADAMEKVGKEGVITVEEG
RGLEDELDVVEGMQFDRGFLSPYFINNQDNMSAELEDPYILLVDKKISNIRELLPVLEAV
AKAGKPLQIIAEDIEGEALATLVVNNMRGIVKVNAVKAPGFGDRRKEMLQDIAILTGGTV
ISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDY
DKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLI
RAIAALDKVDAINDEQKAGVNILRRAMEAPLRQIVFNAGGESSVVVAKVKEGEGSFGFNA
ATEQYGDMLEMGILDPAKVTRSSLQAAASVASLIITTEAMVADEPEDEKAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaattcggtgatagcgcccgtaagcgcatggtagcaggtgtt
aacatcctggcggacgcggtcaaggtaacactgggccccaaaggtcgtaacgtggttctg
gagaagtctttcggcgctccgactgtgaccaaggacggcgtgtctgtggccaaggaaatc
gagctgaaagacaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcttcccag
gccaacgaaactgctggtgacggtaccacgacggcgaccgtactggcccagtccatcgtg
aatgagggtatcaaggccgtgactgccggcatgaacccgatggacctgaagcgtggtatc
gacaaaggtaccgccgaagctgttaaagccatccgtgaaatggccaagccctgcgacgac
agccgcatgatcgcccaggttggcactatctccgccaacggtgacgaaaccatcggtaag
atcatcgcagacgcgatggaaaaagtgggtaaagaaggcgtcattaccgttgaggaaggc
cgtggcctggaagacgagctggacgtggttgaaggcatgcagtttgaccgcggtttcctg
agcccgtacttcatcaacaaccaggacaacatgtctgccgagctggaagacccgtacatc
ctgttggtcgacaagaagatctccaacatccgcgaactgctgccggtgctggaagcagtt
gccaaggctggcaaaccgctccagatcattgctgaagacatcgaaggcgaagccctggct
actctggtggtcaacaacatgcgcggcattgtgaaagtcaacgctgtgaaggcgcctggc
tttggtgaccgtcgcaaggaaatgctgcaggatatcgccattctgactggcggtacggtg
atttccgaagaagtcggcctgaccctggaaaacaccactctggatgacctgggtactgcc
aagcgtgtcaacgtgaccaaggaaaacaccacgatcatcggtggcgctggtgccgaggct
gatatcagcgctcgcgttgagcagattcgcaagcagatcgaagacagcagctctgattac
gacaaagagaagctgcaagagcgcgtcgccaagctggctggcggtgtcgccgtcatcaaa
gtgggcgccggctctgaagttgaaatgaaagagaagaaggcccgcgttgaagacgctctt
cactccacccgcgctgccgttgaagaaggcatcgtagctggtggtggtgttaccctcatc
cgcgccattgcggctctggacaaggtagacgccatcaacgacgagcagaaagccggtgtg
aacattctgcgtcgcgccatggaagctcccctgcgtcagattgtattcaacgcaggcggt
gagtcttctgtggtggttgccaaggtaaaagaaggcgaaggctccttcggcttcaacgct
gctaccgagcagtacggcgacatgctggaaatgggtatcctggatcccgccaaggtaacc
cgttcttccctgcaggcagcggcttctgtcgcttctctgatcatcaccaccgaggcgatg
gttgcagacgagccggaagacgagaaagccggcggtggtatgccggatatgggtggcatg
ggcggaatgggaggcatgggcggcatgatgtaa
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