Marinobacter sp. RI1: MspRI1_30090
Help
Entry
MspRI1_30090 CDS
T10737
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mrx Marinobacter sp. RI1
Brite
KEGG Orthology (KO) [BR:
mrx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrx03016
]
MspRI1_30090
Enzymes [BR:
mrx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MspRI1_30090
Transfer RNA biogenesis [BR:
mrx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MspRI1_30090
Prokaryotic type
MspRI1_30090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BFN14998
LinkDB
All DBs
Position
3345896..3346867
Genome browser
AA seq
323 aa
AA seq
DB search
MEFTFLGTSAGTPTRSRNVTGLALCLSGPKPWYLVDCGEGTQHQVMRTRYSVMQLRAIFI
THIHGDHIFGLPGLLTSASMLGRTEPLDIIAPPQVRRFIDTVIENSDSSLSYPLNFINSE
APGFYWQDDHLGVTNVALSHRVPCRAYVFTERNLERQLQKEKLVADGIEPGPQWGDLQKG
KDVLLDDGRLLRSDDYTQIPRTARNIIVGGDNDTPELLKDACQGTHVLIHEATYTQDVAD
RVGPWPQHSSAQQVARFAQEAKLPNLVLTHFSSRYQSAPGGSPHINQLAAEALQHYTGHL
FLARDFDTYRLEKDFQLHKVDHS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaattcactttccttggcacatcggccggaacaccaacccggtcacgcaacgtcacc
ggcctggcgctttgcctttcggggcccaaaccctggtatctggtggactgcggtgaaggc
acccagcaccaggtgatgcgcacacggtattcggtgatgcagttgcgcgccattttcatc
acccacatccatggtgatcatatcttcgggctaccgggcttgcttaccagcgcttccatg
ctgggtcgcaccgagcctctggacatcattgcgccgccacaggtacgccggtttatcgat
acggtcatcgaaaacagtgactccagcctgagttatccgttgaacttcatcaactcggaa
gctccgggtttttactggcaggatgaccatttgggtgttaccaacgtggcgctttcgcac
cgggtaccttgccgggcctacgtattcacagagcggaacctggaacgtcaactccagaag
gagaaactggttgctgatggcatcgagcctggccctcaatggggtgacctgcagaaaggc
aaagatgttctactggatgacgggcgcctgctgcgcagcgacgactacacccaaatcccg
agaaccgcgcgaaacatcattgtcggcggtgacaacgacaccccggaactgctgaaagat
gcctgccaaggcacccacgtattgattcacgaggccacctacacccaggatgtcgcagac
cgcgttggcccctggccacagcacagctcggcgcagcaggtggcccggttcgcgcaggag
gcaaagctgcccaatttggtactcacccacttcagctcccgctaccagtccgccccgggt
ggcagccctcatatcaaccagctcgccgccgaggcgttgcagcattacacgggccacctt
ttcctggcccgggattttgacacctaccgtctggagaaagacttccagctacacaaagtt
gatcacagctaa
DBGET
integrated database retrieval system
