Marinobacterium rhizophilum: KDW95_03100
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Entry
KDW95_03100 CDS
T08609
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mrz
Marinobacterium rhizophilum
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrz03400
]
KDW95_03100 (sbcD)
DNA repair and recombination proteins [BR:
mrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDW95_03100 (sbcD)
Archaeal homologous recombinant proteins
KDW95_03100 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Abi_alpha
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UTW12683
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All DBs
Position
710717..712009
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AA seq
430 aa
AA seq
DB search
MRILHSSDWHLGQHFMGKSREPEHRAFLAWLIEQVQAQQVDALVIAGDLFDTGTPPSYAR
RLYNQFIADLRLTGCQLVILGGNHDSVSTLHESRELLACLGTTVVGGVTSDPQDQVIVLQ
RRDGTPGAVLCAVPYLRPRDLIESHAGESTQHKRQALSEAIGRHYTVIFEAACARRAALQ
AEYAPAPGAAPAIELPIIATGHLTCVGGQLSESVRELYIGTLEAYPAGAFPPADYIALGH
LHRAQCVGGESHIRYSGSPIPLSFDESRGSKQVLRVDFADGKLAEVMPLAVPVWQPMQSL
SGSLAELEARLQQQFGAEASEAAEPGTPPVWLEIEVRGDDYLSDLQPRVQQLVEGLPVEV
LRIRRQRSGGSTALQADSRETLQELSVREVFVRRLALEEALDDSSRERLTSAFESLLAQL
QDEEAKSCAS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatacttcatagctcggactggcatctcgggcagcacttcatgggaaaaagtcga
gagcctgaacaccgggccttcctggcctggttgatcgagcaggtacaggcccagcaggtg
gatgcgctggtgatcgcaggagacctgttcgataccggcacgccgcccagctatgcccgc
cggctttacaaccagtttattgcggatctgcgcctgacggggtgccagctggtgatcctg
ggcggcaaccatgactccgtctccaccttgcatgaatcccgcgagctgctggcctgtctg
ggcaccaccgtggtggggggcgtgacaagcgacccgcaggaccaggttatcgtgctgcag
cgccgcgacggcacgccgggggcggtactctgtgcggtgccctacctgcggccgcgggat
ctgatcgaaagccatgccggtgaaagtacccagcacaagcgccaggcgctgagcgaggcg
atcggtcgtcattataccgttatctttgaggcggcctgtgcacgcagggccgcgctccag
gcggaatacgcgccggcgcccggtgctgcaccggctatcgagctgccgattatcgccacc
gggcacctgacctgtgttggcggccagctgtccgaatcggtgcgcgaactctatatcggt
accctggaagcctatccggcgggggcctttccgccggccgactatatcgccctgggccat
ctgcaccgggcccagtgcgtcggcggcgagtcccatattcgctacagcggctcgcccatt
cccctgagttttgatgaaagccgcggcagcaagcaggtgctgcgggtggactttgccgat
ggcaagctggccgaggtcatgcccctggcggtgccggtatggcagcccatgcaaagcctg
agcgggtcccttgccgagctcgaagcccggctgcagcaacagtttggcgctgaggcctct
gaggccgcagagcccggcaccccgccggtctggctcgaaatcgaagtgcgcggcgatgat
tacctcagcgacctgcagccccgggtgcagcagctggtggaaggcctgccggtggaagtg
ctgcgcatccgccgtcagcgcagcgggggctccacggccttgcaagcggacagtcgtgaa
accctgcaggaactgtcggtgcgggaggtcttcgtgcgtcgcctggcgctggaagaggcg
ctggatgatagtagccgggaacggctgacaagtgccttcgagtcactgctggcacagctg
caggacgaggaggccaagtcatgcgcatcctga
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