Marinobacterium rhizophilum: KDW95_06640
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Entry
KDW95_06640 CDS
T08609
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mrz
Marinobacterium rhizophilum
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrz01002
]
KDW95_06640
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrz01011
]
KDW95_06640
Peptidases and inhibitors [BR:
mrz01002
]
Cysteine peptidases
Family C82
KDW95_06640
Peptidoglycan biosynthesis and degradation proteins [BR:
mrz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KDW95_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UTW13328
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All DBs
Position
complement(1501792..1503102)
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AA seq
436 aa
AA seq
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MIRLASVCGVLGATVLSGLINAGAVAQPLLAAHSDHRPGTEPDQESRWERGAGAQAPALV
PESGRFESIEDALAHYRGLVLEYRWPPIVATSSLRLGDSDPVVADIRTRLMLLGDLQTRA
SPADAWLFDAPLQAALERFQRRHGLEPDGIFGRRSRAALEVPPRARYQQLQLNQTRLAQF
DTQRAGAHTYVVVNIPAFEMRYVEAGKPVLKMRAIVGKLEARTPLVASQIDSLELNPDWN
VPSGIAYRDIVPEMQESPDALYSKGLELVVGYGAGMRTLPLSELDYERLYRGPQPQQRFW
QAPGPSNPLGLLKFNFPNPYLVYMHGTPSAGLFNRPVRDFSSGCIRIEDPDRLARRLFGL
SGGERGLASVSRLEREIAKGKNRVLSLPSPVPVYTTYWTAWLDDDGQVQFREDLYGHDME
ADKAVSVTQQSRIAAP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgatacgactagcgagtgtttgcggggtgcttggtgccaccgtgctcagtgggctgatc
aatgccggtgctgtggcgcagcccctgctggcggcccactccgatcaccgtccgggtact
gagcctgatcaggaatcccgctgggagcgcggtgccggggcacaggcgccggccctggtg
ccggagtcgggacgctttgagtccattgaggatgccctggcgcactaccgtgggctggta
ctggagtaccgctggccgcccatcgttgcgacgagctccctgcgtcttggggacagcgat
ccggtggtggccgatatccgtacccggctgatgctgctcggtgacctgcagacccgggcg
agtccggccgatgcctggcttttcgatgccccgttacaggcggcgctggaacggttccag
cgtcgccacggcctcgagccggatggcatctttgggcgtcgatcccgcgcggcgctggaa
gtcccccccagagcgcgctaccagcaattgcagctgaaccagacgcgcctggcgcagttc
gacacacagcgtgcgggtgcacacacctatgtcgtggtgaatattccggcgttcgaaatg
cgttatgtcgaagcgggcaagccggtgctgaaaatgcgcgccatcgtgggcaagctcgag
gcgcgtacgccgctggtggccagtcagattgactcgctggaactcaacccggactggaac
gtacccagcggcattgcctaccgcgatatagtcccggaaatgcaagagtcgccggatgcc
ctgtatagcaaggggctcgagctggtggtcgggtatggcgccggcatgcggacgttgccc
ttaagtgaactggattacgagcggctctatcgcgggccgcagccccagcagcgtttctgg
caggcgcctggcccgagcaatccactgggactgctgaagttcaatttccccaatccctac
ctggtgtacatgcacggtacgcccagtgccgggctttttaaccggccggtacgggatttc
agctcaggctgtattcgtatcgaagatccggaccggctggccaggcggctgttcgggttg
tcaggcggtgagcgtggcctggcgtctgtttcccggctggagcgggaaatcgccaagggc
aagaatcgggtattgtcattgccaagcccggtgccggtctataccacgtactggaccgcc
tggctggacgacgatggccaggtacagtttcgtgaggatctttacgggcatgacatggaa
gccgacaaggccgtttccgtgacacagcagtcgcgcattgcggccccctga
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