Marinobacterium rhizophilum: KDW95_09480
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Entry
KDW95_09480 CDS
T08609
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mrz
Marinobacterium rhizophilum
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrz03000
]
KDW95_09480
Transcription factors [BR:
mrz03000
]
Prokaryotic type
Helix-turn-helix
Other families
KDW95_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_30
HTH_8
Mg_chelatase
AAA_3
AAA_5
PAS_8
AAA
AAA_2
AAA_7
HTH_23
HTH_7
nSTAND6
AAA_16
HTH_28
MCM
HTH_22
RsmI_C
HTH_1
DUF815
NUMOD1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UTW13840
UniProt:
A0ABY5HNF4
LinkDB
All DBs
Position
2116862..2118859
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AA seq
665 aa
AA seq
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MSIATSDTSHDRLILDSWERCRAYGLDHGSQPGLQQLASSECKVLREEHNALVHTTGQEV
LPFYENILSNSKCMILLTDCRGQVLNGWGDQRFVGPRQKAFFQQGTSWQERAHGTNAIGT
AIASGQAVQVQRDEHFLKANRFMIGSAAPIFDVNRDLLGVLDVSSDAYLPQAHTLGMVKL
MSQSVENRLIIKMFSAEHFVLTFNTNLDNIDSQWSGLLVFNEAGTVISANRRAELLLGYD
LALASISQLFDCRLRDLKNQPELLPLQLKTPGQHHMYGVIKRPSQQVIQVVDFRQPQPAA
PAPAPTPGSNTDPTRPRDGVIGLDQIGYGDARVDRCVRQAERIIEKDIPILIHGETGVGK
EVFVKALHQHSSRSRFALVAVNCAAIPGELVESELFGYEKGAFTGASNKGAIGLIRKAHR
GTLFLDEIGEMPLQAQARLLRVLQERKVTPLGSTESYPVDIKLVSATNRCLRSQVQDGHF
RQDLYYRVTGLNIELPPLRERTDRRALFQQVHRLHRDPGQSAPLSEEILKLFDLHPWPGN
IRQLISVLQIALAMADDDPIEAWHLPDDFFQDIEQQRNAPPASSAPGSIAQCPPHAPEQG
EPAAQPSVADAASQPPAPLQEAASAEATLAAYSLHQGNISRTAKALGISRNTLYKRLRDL
GLRQS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgcgaccagcgacacctcacatgaccgtctgattctcgactcctgggagcgt
tgccgcgcctacgggctggatcacggcagccagccagggctgcagcaactggcaagttcg
gagtgcaaggtactgcgcgaggaacacaatgccctggtgcacaccaccgggcaggaagtg
ctgcccttctacgagaacattctctccaacagcaaatgcatgattctgctcaccgactgc
cgcggccaggtgctcaacggctggggcgaccagcgcttcgtggggccgcgtcaaaaggcc
ttttttcagcagggcaccagctggcaggaaagagcccacggcaccaatgccatcggtacc
gcgattgcgtccgggcaggcggtgcaggtacagcgtgatgaacacttcctcaaggccaac
cgcttcatgatcggttcggcggcgcccattttcgatgtcaatcgcgacctgctcggtgtg
ctggatgtttccagcgatgcctacctgccccaggcccataccctggggatggtcaaactg
atgtcacagtcggtggaaaaccggctgattatcaaaatgttcagcgctgaacactttgtg
ctcaccttcaacaccaacctggacaacatcgacagccagtggtcgggacttttggtgttc
aatgaagctggcaccgtcatctcggccaaccgccgggccgagttgctgctggggtacgac
ctggcgctggccagtatcagccaactgttcgactgccgattgcgggacctgaaaaaccag
cccgagctgctccccctgcaactcaaaacgcccggccagcatcacatgtacggcgtcatc
aaacgcccgagccagcaggtgattcaagtggttgattttcgccagccccagcccgctgcc
cccgcgccagccccgacccctggctcgaacacagaccccacaaggccccgcgatggcgtc
atcgggctggaccagatcggttatggcgatgcccgggttgatcgctgcgtgcgccaggcc
gaacgcattatcgaaaaggacatccccattttgatccacggtgaaaccggcgtcggcaag
gaggtgttcgtcaaggcgctgcaccagcacagctcgcgcagccgctttgcgctggtggcg
gtcaactgcgccgccatacccggcgaactggtggagtccgaactgtttggctatgaaaaa
ggcgcctttaccggggccagcaacaagggcgccatcggcctgatccgcaaggcgcacagg
ggtacgctgtttctggacgaaatcggcgaaatgccgctccaggcccaggcccgactgctg
cgcgtgctgcaggaacgcaaggtcacaccgctggggtccaccgagtcctacccggtggat
atcaagctcgtttcagccaccaaccgctgccttcgcagccaggtgcaggatggccacttc
cgccaggacctgtactaccgcgtcaccggcctgaatatcgagctgccaccgctgcgcgaa
cgcaccgacaggcgcgcactcttccagcaggtacaccggctgcaccgcgatcccggccag
agcgcgcccctgtccgaggaaatactaaagctgttcgacctgcatccctggcccggcaat
attcgccagctgatcagcgtgctgcagattgcgctggccatggcggacgacgacccgatc
gaggcctggcacctgcccgacgacttctttcaggatatcgaacagcagcgcaacgccccg
cccgcaagttcagccccgggatccattgctcagtgtccgccccatgctcccgagcagggc
gagcccgccgcgcagccctccgttgccgatgcagcgtcccagccgcctgcgccgttacag
gaagccgcgtcggcagaagccaccctggcggcctacagcctgcaccaaggcaatatatcc
cgcaccgccaaggcgctgggcatcagccgcaacaccctgtacaagcgcttgcgcgatctg
ggactgcgccagtcgtaa
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