Marinobacterium rhizophilum: KDW95_10355
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Entry
KDW95_10355 CDS
T08609
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz02020
Two-component system
mrz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KDW95_10355
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDW95_10355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrz03021
]
KDW95_10355
Transcription machinery [BR:
mrz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDW95_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Spore_III_AB
BPL_C
Motif
Other DBs
NCBI-ProteinID:
UTW14003
LinkDB
All DBs
Position
2304567..2306087
Genome browser
AA seq
506 aa
AA seq
DB search
MKQGLHLKIGQHLTMTPQLQQAIRLLQLSTLDLQQEIQEALENNPMLESSDEEHDETPDS
DYNEHQNSEAPQKTAETERDRASAENSDSDDSPQAEDTWNDDIPEELGTDSSWDDTFQSS
TPSGPARDDDGTMESNDTAEETLQDHLEWQLNLTPMSDLDRFIATGIVDGIDANGYLRIS
LDELLEHFKRENPEDFEDVESEDIEAVLHRIQQFDPAGVGGRDLGECLAIQLRQLPESTP
WRKEAIRVVSEFIQLLGSRDYKQLIRRTRLKEHQLQEVILLIQSLNPQPGASITASTAEY
VIPDVVVSKVKGFWTVALNPDTAPRLRINTQYSDLIRRADNSSDNTYLKNHLQEARWFIK
SLQSRNETLLKVSREIVARQEGFLEQGEEAMQPLVLHDIAEAVEMHESTISRVTTQKYMH
TPRGIFELKYFFSSHVGTSDGGAASSTAIRALIKRLVAAESSTKPLSDSKIAQLLDDQGF
KVARRTVAKYREAMNIAPSNERKRLV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagggctccacttaaaaatcggtcagcacctgaccatgaccccccagctgcag
caggccatacgcctgctgcagctgtcgacactcgacctccagcaggaaatccaggaagcg
ctcgaaaacaaccccatgctcgaatcctcggacgaggagcacgacgagacgccggacagc
gattacaacgagcaccagaactccgaagccccgcaaaagactgccgagaccgaacgcgac
cgcgccagcgctgaaaacagcgacagcgatgacagcccccaggccgaagacacctggaat
gacgacatccccgaagagctcggcaccgacagttcctgggacgacaccttccagagcagc
acgcccagcgggcctgcacgggacgacgacggcaccatggagtccaacgacacggcggag
gaaaccctgcaggaccacctggagtggcagctcaacctgacccccatgagtgacctggat
cgcttcattgccaccggcatcgtcgatggcatcgacgccaacggctacctgcgcatctcc
ctggatgaactgctggagcacttcaagcgggaaaaccccgaagacttcgaagacgtcgag
tccgaggatatcgaggctgtgctgcaccgcattcagcaattcgaccccgccggcgtcggc
ggccgtgacctgggcgagtgcctggccatccagctgcgccagctgccggagtcgaccccc
tggcgcaaggaagccattcgcgtggtcagcgagtttatccagctgctcggcagccgcgac
tacaaacagctgatccgccgcacaaggctcaaggaacaccagctgcaggaagtcatcctg
ctgatccagagcctgaatccgcagcctggcgccagcattaccgccagtacggctgaatac
gtcatccccgatgtcgtggtcagcaaggtcaagggcttctggaccgttgcccttaacccc
gacacggccccgcgcctgcgcatcaacacccagtattcggacctgatccggcgcgccgac
aacagctctgacaacacctacctgaagaaccacctgcaggaagcacgctggttcatcaag
agcctgcaaagccgcaacgagaccctgctcaaggtatccagggaaatcgtcgcccgccag
gaaggtttcctggagcagggtgaagaagccatgcagccgctggtactgcacgacatcgcc
gaagccgtcgagatgcacgagtccaccatttcccgggtgaccacgcaaaagtacatgcac
acgccgcggggcatcttcgagctgaagtattttttctccagccatgtgggtaccagtgat
ggcggtgccgcctcctccaccgccatccgcgccctgataaagcgcctggtcgcggccgaa
agcagtaccaaaccactgagcgacagcaagattgcccagctactggatgaccagggattc
aaggtcgccagacgcaccgtggcgaaataccgtgaagcaatgaatattgcaccttctaat
gagcgcaagcgtctggtttaa
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