Marinobacterium rhizophilum: KDW95_12355
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Entry
KDW95_12355 CDS
T08609
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz00071
Fatty acid degradation
mrz00280
Valine, leucine and isoleucine degradation
mrz00310
Lysine degradation
mrz00362
Benzoate degradation
mrz00380
Tryptophan metabolism
mrz00410
beta-Alanine metabolism
mrz00640
Propanoate metabolism
mrz00650
Butanoate metabolism
mrz00907
Pinene, camphor and geraniol degradation
mrz00930
Caprolactam degradation
mrz01100
Metabolic pathways
mrz01110
Biosynthesis of secondary metabolites
mrz01120
Microbial metabolism in diverse environments
mrz01200
Carbon metabolism
mrz01212
Fatty acid metabolism
Module
mrz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KDW95_12355 (fadB)
00650 Butanoate metabolism
KDW95_12355 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KDW95_12355 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KDW95_12355 (fadB)
00310 Lysine degradation
KDW95_12355 (fadB)
00380 Tryptophan metabolism
KDW95_12355 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KDW95_12355 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KDW95_12355 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KDW95_12355 (fadB)
00930 Caprolactam degradation
KDW95_12355 (fadB)
Enzymes [BR:
mrz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KDW95_12355 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KDW95_12355 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KDW95_12355 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KDW95_12355 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTW10108
UniProt:
A0ABY5HCN5
LinkDB
All DBs
Position
complement(2760800..2762947)
Genome browser
AA seq
715 aa
AA seq
DB search
MQYAGQAVSVRDAGDGLYEVVFDLAGDSVNKFNQATLAELRDAVAALQGSDGVQGVLFSS
AKDVFIVGADITEFTQMFERSEDEIVAGLLEMNQVFNSIEDLPYPTVTAINGVALGGGFE
LCLATDYRVASTVAKVGLPEVKLGIYPGWGGTVRLSRLLGVDNANEWVCGGAEHKAVAAL
KAGAVDAVVDPAQLRDAGLDLLRNCIAGKFDYRARRLEKQSAIRLNQVEQMMAFESAKGV
IGAQAGPHYPAPMAALKTMQKHAGLTRDAAQAVEARGFAKLAKTEVCRALIGLFMKDQQV
KKTGRKHAAGAAPVQQAAVLGAGIMGGGVAYQSASRGVPILMKDINEKALQLGLDEATKL
LGGQLKRGRLDAAGVAKTLTMIRPTLSFGDIANVDLVVEAVVENVKVKQAVLAETEQHLK
DGAILASNTSTISITELATALKKPENFCGMHFFNPVHKMPLVEVIRGEKTSDAAVARTVA
YAQTLGKTPIVVNDCPGFLVNRVLFPYFGGFSLLLRDGGDFRRIDKVMEGFGWPMGPAYL
LDVVGIDTAHHADAVMAAGFPDRMTHEGENAIDRLYSLERFGQKNARGFYAYAPDRRGKL
KKAPDETVTAALSGVVGAAREFSDEEIIERMMIPLCIETVRCLEDNIVASAADADMGLIY
GIGFPPFRGGALYYLDQMGLANFCAMAAKYADLGPLYQPTTRMQQMAERGATYYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgcaggacaggcggtcagcgtacgggacgcaggcgacggtctttacgaggtt
gtttttgatctcgcgggcgattcggtcaacaagttcaaccaggccaccctggccgagttg
cgcgacgccgtggcggcgttgcagggcagcgacggcgtgcagggtgtactgttcagcagc
gccaaggacgtctttatcgtgggtgccgatatcaccgaattcacgcagatgttcgagcgc
agcgaagacgagattgtcgccggcctgctggagatgaatcaggtattcaatagcatcgag
gatttgccgtaccccacggtgaccgccatcaacggcgtggccctgggtggcggcttcgaa
ctttgcctggccactgattaccgggtggcgagcacggtggccaaggttggcctgccggaa
gtgaagctgggcatctatccgggctggggcggcaccgtgcggctgtcgcgcctgctgggt
gtcgacaatgccaacgagtgggtttgtggcggtgccgagcacaaggcagttgcagcgctc
aaggcgggtgcagtggatgcggtagtcgaccccgcgcaactgcgcgatgcggggctcgac
ctgctgcgtaactgcattgccggcaagtttgactaccgggcacgcaggctcgaaaaacag
agtgccatcaggctcaaccaggttgaacagatgatggcgtttgagtccgccaagggcgtg
attggcgcccaggccggcccccattacccggcgcccatggcggcgctgaaaaccatgcag
aaacacgccggtctcacgcgtgatgccgcccaggcggtggaagccaggggctttgccaag
ctggcgaagaccgaggtctgcagggcgctgatcggtctgttcatgaaggatcagcaggtc
aagaagaccggccgcaagcatgccgcaggcgcggcgccggtgcagcaggcggcggtactg
ggcgccggcatcatgggcggcggtgtggcctaccagtcggcatcccgcggggtgccgatc
ctgatgaaggacatcaacgaaaaagccctgcagctgggcctggatgaggccacgaagctg
ctgggcggccagctcaagcgcggccggctggatgccgccggcgtcgccaaaaccctgacc
atgattcgtcccaccctgagctttggcgacatcgccaatgtcgacctggtggtcgaggcg
gtggtggaaaacgtcaaggtaaagcaggccgtgctggcggaaaccgagcagcacctcaag
gacggcgccattctggcctccaatacctcgaccatctccatcaccgagctggcgacggcg
ctgaagaaacccgaaaatttctgcggcatgcacttcttcaacccggtgcacaagatgccg
ctggtcgaggtgattcgcggcgagaaaacctcggatgccgccgtggcccgtaccgtggcc
tacgcccagaccctgggcaagacgcccatcgtggtcaacgattgcccgggctttctggtg
aaccgggtgctgttcccctattttggcggtttcagcctgctgttgcgcgatggtggcgac
ttccgccgcatcgacaaggtgatggaaggcttcggctggccgatgggcccggcctatctg
ctggatgtggtcggcatagataccgcacaccacgccgatgcggtgatggcggcgggcttc
ccggatcgcatgacccatgaaggcgaaaatgccatcgatcgcctgtacagcctggagcgc
tttggccagaaaaatgccaggggcttttatgcctatgcgccggataggcgcggcaagctg
aagaaggctcccgatgagacggtgaccgcggcactgagcggtgttgtgggcgcggcgcgg
gagttttccgatgaggaaattatcgagcgcatgatgatcccactgtgtatcgagaccgtg
cgctgcctcgaagacaacatcgtggcctcggccgccgatgctgacatgggactgatttac
ggcattggtttcccgccgttccgtggcggtgcgctctactacctggatcagatgggcctg
gcgaatttctgtgccatggctgccaagtatgccgaccttgggcctttgtaccagcccact
acgcggatgcaacagatggccgagcgcggcgcaacctactacggctga
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