Marinobacterium rhizophilum: KDW95_13125
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Entry
KDW95_13125 CDS
T08609
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz00260
Glycine, serine and threonine metabolism
mrz00460
Cyanoamino acid metabolism
mrz00630
Glyoxylate and dicarboxylate metabolism
mrz00670
One carbon pool by folate
mrz00680
Methane metabolism
mrz01100
Metabolic pathways
mrz01110
Biosynthesis of secondary metabolites
mrz01120
Microbial metabolism in diverse environments
mrz01200
Carbon metabolism
mrz01230
Biosynthesis of amino acids
mrz01240
Biosynthesis of cofactors
mrz04981
Folate transport and metabolism
Module
mrz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KDW95_13125
09102 Energy metabolism
00680 Methane metabolism
KDW95_13125
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KDW95_13125
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KDW95_13125
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KDW95_13125
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KDW95_13125
Enzymes [BR:
mrz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KDW95_13125
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UTW10246
LinkDB
All DBs
Position
complement(2940145..2941398)
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AA seq
417 aa
AA seq
DB search
MFRMQDAIEGFDDELFQAMSAETQRQEDHIELIASENYTSVRVMRAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVERLAIERACTLFGADYANVQPHSGSQANAAVFLALLEPGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGLDEATGEIDYDEVQRQANEHRPRMIIAGFSAYSR
VVDWQRFRDIADSVGAWLFVDMAHVAGLVAAGIYPSPLPYADVVTTTTHKTLRGPRGGLI
LAKANEALEKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALEPSFTEYQRQVVDNARAMAS
VFIERGFEVVSDGTDNHLFLLSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGSPAVTTRGFKQEQCRELTHWICDILDDLDNEELIAEVRFKVARLCRNYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatgcaagacgcaatcgaagggttcgacgacgaacttttccaggccatgagc
gcggaaacgcagcgccaggaagatcatatcgagctgatcgcctccgagaactacaccagt
gtgcgtgtcatgcgcgcccagggctcgcagctgaccaacaagtatgccgaaggctatccg
ggcaaacgctactacggtggctgtgaacatgtggatgtggtcgagcgcttggcgatcgag
cgtgcttgcacgctgtttggtgcggattacgccaatgtgcagccgcactccggctcccag
gccaatgccgcggtattcctggccctgctggagcccggtgatacggtgctgggcatgagc
ctggcccatggcggtcacctgacccacggtgccaaggtgagcttttccggcaaactttac
aatgccgtgcagtacggactggatgaggccaccggcgaaatcgactacgacgaagtgcag
cgccaggcgaacgaacatcgcccccgcatgattatcgccggcttctcggcctattcccgt
gtggtggactggcagcgttttcgcgacatcgccgacagcgtgggtgcctggttgtttgtg
gacatggcccatgtggcaggcctggtggcagccgggatctatccgagcccgctgccctat
gccgatgtggtcaccaccacaacgcacaagacactgcgcggtccccgtggcggcctgatt
ctggcgaaagccaacgaagcgctggagaaaaaactcaactcggcggtattcccgggtggc
cagggcgggccgctgatgcacgtgatcgccgccaaggccgtggccttcaaggaagcgctg
gaaccatcctttaccgagtatcagcgccaggtcgtggacaatgcccgggccatggcatcg
gtattcatcgagcgcggcttcgaggtggtatccgatggtaccgacaatcacctgttcctg
cttagcctgatccgccaggggctgacgggcaaggacgccgatgcggccctggggcgggcg
cacattaccgtgaacaagaatgcggtgcccaacgatccgcaatcgccctttgtcacatcg
gggctgcgcatcggctcacccgctgtaaccacacgcggcttcaagcaagagcagtgccgc
gaactgacgcactggatctgtgacatcctggacgatttggacaacgaggaactgatcgcc
gaggtgcgtttcaaggtggcgcgcctgtgccgcaactacccggtgtatggctga
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