Marinobacterium rhizophilum: KDW95_13355
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Entry
KDW95_13355 CDS
T08609
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz03030
DNA replication
mrz03430
Mismatch repair
mrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDW95_13355 (dnaE)
03430 Mismatch repair
KDW95_13355 (dnaE)
03440 Homologous recombination
KDW95_13355 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrz03032
]
KDW95_13355 (dnaE)
03400 DNA repair and recombination proteins [BR:
mrz03400
]
KDW95_13355 (dnaE)
Enzymes [BR:
mrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDW95_13355 (dnaE)
DNA replication proteins [BR:
mrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDW95_13355 (dnaE)
DNA repair and recombination proteins [BR:
mrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDW95_13355 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UTW10288
UniProt:
A0ABY5HD76
LinkDB
All DBs
Position
complement(2985508..2989002)
Genome browser
AA seq
1164 aa
AA seq
DB search
MATPQFVHLRLHTEYSLVDGLIRVKEAVAAAKAAGMPAVAVTDQSNLFATIKFYKAALNA
GIKPICGVDVHVMNESDPAGEPYRMTLLVRNGKGYRNLMELVSRAYADGQNIVSEKAVLK
KAWIRERSEGLIALSGGRLGEVGRALQSDKASPIEVLREWMEIFPDSYYLEVQRTGRQGE
EDLVHACVAMAHETGCPLVATNEVMFLTADDFDAHEARVCINLSRTLDDARRPRDYSDQQ
YFRSAAEMQALFADIPEALENSVEIARRCNIEIELGTYYLPRFPVPEGMLMDDYFRQVSF
DGLEERLEILLDRADPEYDAKRQVYIDRLEFELEIIIQMGFPGYFLIVMDFIKWGKENGV
PVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDKVID
YVARTYGRDAVSQIITFGTMAAKAVVRDVARVQGKPFGLADRLSKLIPFEVGMTLGKAWE
QESQLREFVESSEEAQEIMEMAYKLEGVTRGVGKHAGGVVIAPTKLTDFAATYCDEVGEG
LVTQFDKNDVEEAGLVKFDFLGLRTLTIIDWALKTINDIRVPAGEEPLDIALIDLEDKTT
FDLLQSAETTAVFQLESSGMKDLVRRLKPSRFEDIVALVALFRPGPLQSGMVDDFINRKH
GRAEMAWPHVDYQLDSLQPVLEPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKK
PEEMAKQRAIFLEGCEGQGIDRDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKA
HYPAPFMAAVISSDMQNTDKVVIFIEECRSMGLAPAVPDVNSSEYMFTVNGAGEIVYGLG
AVKGVGEGPIEAIVQARQDGQGNFKDIFDFCQRVGAKKLNKRVMEALVRSGALDRLGASR
AVLFEAIADALKAADQSARNQDAGMFDLFGEMPVEASRDAYADYRQVREWTDKERLTGEK
DTLGLYLTGHPIDEYQKELSHFISKRIADVQPARGRQQKMAGLVIDLRLKKTKKGDSLCF
VTLDDRSARIDVTLYGEAYEMARSKLNKDAVLIMEGEVLQDDYNGGLKVKGSRVMDISEA
RAQYARCLEIHGDSQSLGGRKLRELADVLSSHRGNGSMAVTLRYRRVDAEASLALGDNWK
VQASDELVLQLMDRFGTGAVALRY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccccaattcgttcacctgcgtttgcataccgagtattccctggtcgacggc
ctgatccgcgtcaaggaagcggtagcggcggccaaggcggcgggcatgccggcggtggcg
gtgaccgatcagagcaacctcttcgcgaccatcaagttttacaaggcggcgctcaatgcc
ggcatcaagcccatctgcggcgtggatgtgcatgtcatgaacgagtcggacccagcgggc
gagccgtatcgcatgacgctgctggtgcgcaacggcaagggctatcgcaacctgatggaa
ctggtgtcccgggcctacgccgacggccagaatatcgtcagtgaaaaggcggtgctgaaa
aaagcctggatccgggaacgctccgaaggcctgatcgcgctgtccggagggcgcctgggt
gaagtgggtcgggcgctgcagtcggacaaggcctcccccatcgaggtgctgcgcgagtgg
atggagatctttccggacagctattacctggaagtgcagcgtaccgggcgccagggggaa
gaagacctggtgcatgcctgtgttgccatggcccacgaaaccgggtgtccgctggtggcg
accaacgaggtgatgttcctgacggcggacgacttcgacgcccacgaggcgcgtgtctgc
atcaaccttagccgcaccctggatgatgcgaggcggccgcgggattacagtgaccagcag
tatttccgctcggccgccgagatgcaggcgctgttcgccgatattcccgaggcgctggag
aacagtgtcgagatcgcaaggcgctgcaatatcgagatagagctgggaacctactacctg
ccacgcttcccggtgcccgaaggcatgctgatggatgactatttccgtcaggtcagcttc
gacggcctggaggaacggctcgagatcctgctcgaccgcgcggacccggagtacgacgcc
aagcgccaggtgtatatcgaccggctcgagttcgaactcgagatcatcatccagatgggt
ttccccggttacttcctcatcgttatggactttatcaagtggggcaaggagaacggcgta
ccggtagggccgggacgaggttcgggtgccggctccctggtggcctatgcgcagaagatt
accgacctggatccgctggaatacgacctgctgttcgagcgcttcctgaaccctgaacgt
gtctccatgcccgacttcgatatcgatttctgcatggataaccgcgacaaggtgatcgac
tacgtggcccgcacctacggccgtgatgcggtgtcccagatcattaccttcggcaccatg
gcggccaaggcggtggtgcgcgacgtggcccgcgttcagggcaagccctttggcctggcc
gaccgcctttccaagctgatcccgtttgaagtgggcatgacgcttggcaaggcctgggaa
caggagtcccagctgcgtgaattcgtggaatccagcgaagaagcgcaggaaatcatggaa
atggcctacaagctggagggggtgacccgcggcgtcggcaagcacgccggtggtgtggtg
attgcaccgaccaagctgacggacttcgccgccacctactgcgacgaagtgggcgagggc
ctggtaacccagttcgacaagaacgatgtcgaggaagccgggttggtgaagttcgacttc
ctggggctgcgcaccctgaccatcatcgactgggcgctgaaaacgatcaacgacatccgc
gtgcccgccggtgaagagccgctggatatcgcgctgatcgacctggaagacaagaccacc
ttcgacctgctgcaaagcgccgaaaccacggcggtgttccagctcgagtccagcggcatg
aaggatctggtgcggcgcctcaaacccagccgcttcgaggacatcgtcgccctggtggcc
ctgttccggccagggccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcac
ggccgcgccgaaatggcctggccgcacgtggattaccagctagacagcctgcaacccgtg
ctggagccgacctacggcatcatcctgtaccaggagcaggtgatgcagatcgcccaggtc
atggcgggctacacgctcggcggcgccgacatgctgcgacgcgccatgggcaagaagaag
cccgaggaaatggccaagcagcgcgccatcttcctggagggctgcgaaggtcaggggatt
gaccgggacctggcgggcaatatcttcgacctggtggaaaaatttgccggttacggcttc
aacaagtcccactccgccgcctatgcgctggtgtcctaccagaccgcctggctcaaggcg
cattacccggcgccctttatggcggcggttatttcttcggacatgcagaacaccgacaag
gtggtgatcttcatcgaagagtgccgcagcatgggactcgcaccggcggtgccggatgtg
aacagcagcgagtacatgttcaccgtcaacggggcgggggaaatagtctatggcctgggg
gccgtcaagggcgtgggcgaggggccgatcgaggccatcgtgcaggcgcgccaggacggg
cagggcaacttcaaggatatcttcgatttctgccagcgcgtgggtgccaaaaagctcaac
aagcgggtgatggaagcgctggtgcgctccggtgccctggaccgccttggcgccagccgt
gcggtactgttcgaggcgatcgccgacgccctcaaggcggcggatcagagtgcgcgcaac
caggatgccgggatgttcgacctgttcggtgaaatgccggtggaggcgtcccgcgatgcc
tacgccgattaccgccaggtgcgcgagtggaccgacaaggagcgcctgaccggcgaaaaa
gacaccctggggctctatctcaccggccaccccatcgatgagtaccagaaggaactgagt
cactttatcagcaagcggatcgccgatgtgcagccggcccgcggtcggcagcagaagatg
gcgggcctggtgatcgacctgcggctgaagaagaccaagaagggcgactcgctctgcttt
gtcaccctggacgaccgcagtgcgcgtatcgatgtcactctctacggcgaggcctacgaa
atggcccgaagcaagctgaacaaggatgcggtgctgatcatggagggcgaggtgctgcag
gatgactacaatggcggcctcaaggtcaagggcagccgggtcatggatatcagcgaggcg
cgggctcagtatgcccgctgtctcgaaatccacggcgacagccagagcctgggagggcgc
aagctgcgcgagctggcggatgtgctgagcagtcatcgcggcaacggcagcatggccgtt
accttgcgttatcgccgcgtggatgccgaagccagtcttgcgctgggagacaactggaag
gtgcaggccagtgacgagctggtactgcagctgatggatcgctttggcaccggcgccgtg
gccttgcgctactga
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