Marinobacterium rhizophilum: KDW95_13780
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Entry
KDW95_13780 CDS
T08609
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz03410
Base excision repair
mrz03430
Mismatch repair
mrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDW95_13780 (recJ)
03430 Mismatch repair
KDW95_13780 (recJ)
03440 Homologous recombination
KDW95_13780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrz03400
]
KDW95_13780 (recJ)
DNA repair and recombination proteins [BR:
mrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KDW95_13780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDW95_13780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KDW95_13780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF7280
Motif
Other DBs
NCBI-ProteinID:
UTW10369
UniProt:
A0ABY5HGD7
LinkDB
All DBs
Position
complement(3075873..3077609)
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AA seq
578 aa
AA seq
DB search
MTDIQIERRPDPDSSLPVFSETHPVLARIYAARGVQSLNLLGRSLSELLPDSGLHGLDAA
VARLVRAITAGEHILIVGDFDCDGATSTSVAVLALRMMGAAEVGYLVPNRFEYGYGLSPE
IVEVARARGPQLLVTVDNGISSLDGVAHANACGMDVVVTDHHLAGSELPAACAIVNPNQP
GCGFIAKSTCGVGVIFYVMIALRRALSANGWFAQQNMAAPNLASLLDLVALGTVADVVAL
EHNNRVLVHQGLQRIRAGKARPGIAALIEVSGRTRSRLVASDLGFALAPRLNAAGRLEDM
SIGIECLLTDDADRALELARTLDELNQERRGIEQEMQQQALHSLARLELDESELPMGLCL
YDESWHQGVIGILASRIKERVHRPVIAFAPGDDGQIKGSARSISGFHIRDGLDAIAARYP
GMLSKFGGHAMAAGMTLDTAQFADFRTAFDEQVRLQLDAAALTRRLLTDGTLGAADFSVE
LAEVLREGGPWGQMFPEPLFDGEFGLLQQRIVGQRHLKLVLMEPTSGLAIDAIWFNIDTV
HWPDTSVQRVRVVYRLDVNEFRGQRNLQLMVEHLEAIG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatccagattgaacggcggcctgacccggacagcagcctgccggtattcagc
gaaacccatccggtgctggcgcgcatctatgccgcccgcggcgtgcagtcgctgaacctg
ctggggcgctcgctcagtgagttgctgccggactcgggcctgcacgggctggacgccgcc
gtggcccggctggttcgggccattaccgctggcgagcacatactgatcgtcggcgacttc
gactgtgacggcgctaccagtacctcggtggcggtgctggcgctgcgcatgatgggggcg
gcagaggtgggttacctggtccccaatcgcttcgagtacggttacggcctgagtccggag
attgtcgaggtggcgcgcgcgcgcgggccgcaattgctggtgacggtggataacggcatt
tccagtctggacggtgtggcccatgccaatgcctgcggtatggatgtggtggtcacggat
catcacctggccggcagcgagctgccagcggcctgcgccatcgttaaccctaaccagccc
ggctgcggttttatcgccaagtcgacctgtggcgtgggggtgattttttacgtcatgatc
gccttgcgtcgtgccctcagcgccaacggctggttcgcgcagcagaacatggcggcgccg
aatctggcgagcctgctggacctggtagcattgggtaccgtggccgatgtggtggcgctg
gaacacaacaaccgtgtgctggtgcatcagggcttgcagcgtattcgcgccggcaaggcg
cgccccggtatcgctgccctgattgaggtttccggtcgcactcggtcgcgcctggtggcc
agcgatctgggctttgccctggcgccgcgcctcaatgctgccggccgcctggaagacatg
tccatcggcatcgagtgcctgctcaccgatgatgcggaccgtgcgctggagcttgcccgc
acgctagacgagctgaaccaggagcgccggggcattgagcaggaaatgcagcagcaggcg
ctgcattcgttggcgcggctcgagctggatgaatccgagttgcccatggggctctgcctc
tatgatgaaagctggcaccagggcgtgatcggcattctggcatcgcgcatcaaggagcgg
gtacatcgcccggtgattgcctttgcgcccggcgatgatggccagatcaagggctcggca
cgctcgatcagcggtttccatattcgtgatggcctggatgctatcgccgcgcgctacccg
ggtatgcttagcaagtttggcggccatgcgatggcagcgggcatgacgctggatacggca
cagttcgccgatttcagaaccgcctttgacgagcaggtgcgtctgcagcttgatgcggct
gcactgacgcgccggctactgacggacggcaccctgggcgcggcggatttcagtgtcgaa
ctggctgaagtgctgcgcgagggagggccctgggggcagatgttcccggagccgctgttc
gatggcgagtttggtctgttgcaacagcgtatcgtcgggcagcgccacctcaagctggtg
ctgatggagccgactagcggactggccattgatgccatctggtttaatattgataccgtg
cactggccggatacgtcggtgcagcgcgtgcgggtggtttaccggctggatgtgaacgag
tttcgcggccagcgtaatctgcagctgatggtggagcaccttgaagccatcggctga
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integrated database retrieval system
