Marinobacterium rhizophilum: KDW95_15505
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Entry
KDW95_15505 CDS
T08609
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
mrz
Marinobacterium rhizophilum
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrz03400
]
KDW95_15505
DNA repair and recombination proteins [BR:
mrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KDW95_15505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_16
Zn_Ribbon_1
AAA_22
zf-tcix
SLFN-g3_helicase
AAA_30
DZR
Zn_ribbon_3
TniB
AAA
Motif
Other DBs
NCBI-ProteinID:
UTW10687
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All DBs
Position
3475359..3477113
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AA seq
584 aa
AA seq
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MKDTGTTIRLRPYQQEAVDATLRHFRAGDEPAVIVLPTGAGKSLVIAELARLARRRILVL
AHVRELVEQNHAKYAAFGLDASIFSAGLGQKDSGHQVTFASVQSVARNLDQFRNAYSLLI
IDECHRVSDGDDSQYQQVISCLREQNPSLKVLGLTATPYRLGQGWIYQHHYRGFVRSEDA
RPFRHCIYELPLSQLIREGFLTRPELVDASIAHYDFSALQPSTSGQYNETELNSLLSRYP
RVTRSICEQIQERAQARAGVMIFAATVKHAREITGYLPGDCTALVTGGTPAAERESLITR
FKARELKYLVNVAVLTTGFDAPHVDLIAIMRPTQSVSLYQQIVGRGLRLAPGKTDCLVID
YAGNGFNLFAPEVGSRKPSSDSEPVQVFCPGCGFANIFWGKTDGAGSVTEHYGRRCQGLL
EDDSGHKEQCDYRFRFKECPHCGAENDIAARQCHQCSEAIIDPDDLLKRALQLRDARVIR
CAGVSFAEHKGALRISYHDEEGEELHERFDLRQSGQRAVFNRLFGRRFNGATEPRRFVTL
AEVLEAAPAFSAPDFVVARKAGPHWRVRERLFDYAGRYRKANEL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataccggcaccacaatcaggctgcggccctaccagcaggaagcggtagacgcg
accctgcggcactttcgcgccggtgacgaacccgccgtcatcgtattgccaaccggcgcc
ggcaagagcctggtgatcgccgaactggcgcgcctggcccggcgccgtatcctggtactg
gcccacgtgcgcgaactggtcgagcagaaccacgccaaatacgccgcctttggcctggac
gccagtatattttccgccggactcgggcagaaagacagcgggcaccaggtgacgttcgcc
agcgtgcagtcggtggcacgcaacctggaccagttccgcaatgcctactcgctgctgatc
atcgatgagtgccaccgtgtcagcgacggtgatgacagccagtaccagcaggtcatcagc
tgcctgcgcgaacagaaccccagcctcaaggtcctcgggcttactgccacgccctaccgc
ctgggccagggctggatttaccagcatcactaccgcggttttgtgcgcagcgaagatgcc
cggccctttcgccactgcatctacgagctgccactgtcacagctgattcgcgaggggttc
ctgacccgccccgaactggtggatgccagtattgcccactatgacttttccgcgttgcag
cccagcaccagtgggcagtacaacgaaaccgagctcaacagcctgctgagccggtacccc
cgggtgaccaggagcatctgcgaacagattcaggaacgggcgcaagcgcgcgctggcgtc
atgatttttgccgccacggtaaagcatgcccgggaaatcaccggatacctgcccggcgac
tgtaccgccctggtcaccggtggcacgccggcggctgaacgcgagtcgctgatcacgcgt
ttcaaggcccgggagctcaaatacctggtaaatgttgccgtgctgaccaccggcttcgat
gccccccacgtggacctgattgcgattatgaggcccacccagtcggtcagcctgtaccag
cagatcgtcggccgcggcctgcgcctggcgcccggcaagaccgactgcctggtcatcgac
tacgccggcaacggcttcaacctctttgccccggaagtcggcagcaggaagcccagcagc
gacagtgagccggtacaggtgttctgcccgggctgcggctttgccaacattttctggggc
aagaccgatggcgccggcagcgtgaccgagcactacggccgccgctgccaggggctgctt
gaagatgactcaggccacaaggagcagtgcgactaccgttttcgcttcaaggagtgcccg
cactgcggtgccgagaacgacatcgccgcccgccagtgccatcagtgcagcgaggccatt
atcgaccccgacgacctgctcaagcgcgccctgcagctcagggatgcccgcgtcatccgc
tgtgccggcgtcagctttgccgagcacaagggcgcgctgcgcatcagttatcacgacgag
gaaggcgaggagctgcacgaacgtttcgacctgcgccagagcggccagcgggcggtgttc
aaccgcctgttcggccgccgcttcaacggcgccaccgagcctcggcgcttcgtcaccctg
gccgaggtgctggaggcggccccggccttcagcgcaccggacttcgtggtcgcccgcaag
gccggcccgcactggcgcgtgcgcgagcgcctgttcgactatgccggccgctaccgcaag
gcgaatgaactgtaa
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