Marinobacterium rhizophilum: KDW95_16220
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Entry
KDW95_16220 CDS
T08609
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz00300
Lysine biosynthesis
mrz00470
D-Amino acid metabolism
mrz01100
Metabolic pathways
mrz01110
Biosynthesis of secondary metabolites
mrz01120
Microbial metabolism in diverse environments
mrz01230
Biosynthesis of amino acids
Module
mrz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDW95_16220
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDW95_16220
Enzymes [BR:
mrz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KDW95_16220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AAL_decarboxy
Motif
Other DBs
NCBI-ProteinID:
UTW10823
UniProt:
A0ABY5HF10
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All DBs
Position
3636771..3637970
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AA seq
399 aa
AA seq
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MEFRFNAVAQAAARLQADSADPVCAYIYDLPALRRHVQSLVASLPANCELFYAVKANAER
PVLDVLEQHLHGFEVASGGEIDWVRQQFPEVPLIFGGPGKLDSELTLALAQRVELVHVES
LAELRRLAALLQAQGGTQAILLRMNLALPSLPQTTLTMGGKPTPFGIDPVELPACIDFIR
AHPQLQLRGFHFHLVSHQQDAGAHLALLADYFRQVRHWREQFGLKIDHINVGGGIGINYR
APESQFDWEQFSAGLHRLIAREQMASFRIRFECGRYLTAPCGYYLMEVLELKRNHGSWFA
ICRGGTHHFRTPAAQGHDHPFRRLPGGSGERLRGQKVTVVGQLCTPKDVLASQVEVAELA
VGDLLLFSLAGAYAWNISHQQFLRHPAPLMHYIDETEPA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgattcaatgcggtggcgcaggccgccgcccggctgcaggcggacagtgcc
gatcctgtctgcgcctatatctatgacctgccagcactgcgacgccatgtgcagtccctg
gtggcatccctgccggccaactgcgagctgttctatgccgtcaaggcgaacgccgaaaga
ccggtactcgatgtgctcgaacagcatttgcacggttttgaagtggcatccggcggcgag
atcgactgggtgcgccagcagtttcccgaggtgccgctgatctttggcggccccggcaag
ctcgattccgagctgacgcttgcgctggcgcagcgtgtcgagctggtgcatgtggaaagc
ctggccgaactgcgccgcctggcagccttgctccaggcccagggggggacgcaggccata
ctgctgcgcatgaacctggccctgcccagcctgccgcagaccaccctgaccatggggggc
aagccgacaccctttggtatagacccggtggagttgccggcctgcatcgactttatccgg
gcgcatccgcagctgcagctgcggggttttcactttcacctggtgtcgcaccagcaggac
gccggcgctcacctggccctgctggcggactacttccgccaggtacggcactggcgcgag
cagttcgggctcaagatcgaccacatcaatgtcggcggcggtatcggtatcaactaccgt
gcgcccgagtcccagttcgactgggagcaattcagcgccggcctgcaccggctgatcgcc
cgggaacagatggcgtcctttcgcatccgcttcgagtgcggccgctacctgacggcaccc
tgtggctattacctgatggaggtgctggaactcaaacgcaaccacggcagctggttcgcc
atctgtcgtggcggcacccatcattttcgtacccccgccgcccaggggcacgatcatccg
ttcaggcgcctgcccggcggcagcggcgagcggctgcggggccagaaggtcacggtggtc
gggcagctctgtacgcccaaggatgtgctggcgtcccaggtcgaggtggcggagctggcg
gtcggtgacctgctgctgttcagcctggccggtgcctacgcctggaatatctcccatcag
cagtttctgcgtcatccggcgccgctgatgcactatatcgacgagacggagccggcctga
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