Marinobacterium rhizophilum: KDW95_17545
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Entry
KDW95_17545 CDS
T08609
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDW95_17545 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrz03021
]
KDW95_17545 (rpoA)
03400 DNA repair and recombination proteins [BR:
mrz03400
]
KDW95_17545 (rpoA)
Enzymes [BR:
mrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDW95_17545 (rpoA)
Transcription machinery [BR:
mrz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDW95_17545 (rpoA)
DNA repair and recombination proteins [BR:
mrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDW95_17545 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UTW11061
LinkDB
All DBs
Position
3907211..3908215
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVNEFLSPRHIDVQEISKTRAKVTLEPLERGFGHTLGNALRRILLSSMPGFAFTEVE
IDGVLHEYSTIEGVQEDVIEILLNLKGVSVALYNGEEVTLTLSKSEPGPVTAGDIQLTQD
VEIANPEHVIAHLNEGASLNMQLKVTRGRGYVPADTRTSDEDETRAIGRLQLDATYSPVR
RVSYVVESARVEQRTDLDKLVIDIESNGTIDPEECIRRAATILQQQLAVFVDLEDAADQA
KVEPAEPEIDPVLLRPVDDLELTVRSANCLKAEQIYYIGDLIQRTEVELLKTPNLGKKSL
TEIKDVLASKGLSLGMRLENWPPASLKNDDKVAS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttctgtaaacgagtttctaagcccgcgtcacattgacgtacaggaaatcagc
aaaactcgcgcaaaggtgactctcgagccgctggagcgtggttttggccacacgctgggt
aatgcactgcgccgcattctgctgtcttctatgccgggctttgccttcacagaagtagag
atcgatggcgtgctgcacgagtacagcaccattgagggcgttcaggaggatgtcattgag
atcctgctgaacctgaaaggcgtttcggtagcactttacaacggtgaagaagttaccctg
accctgagcaagtccgagccgggtcctgttacagccggagatatccagctgacccaggat
gtggaaattgcaaacccggaacacgtgatcgctcacctgaacgaaggtgcgagcctgaac
atgcagctgaaagtaacccgcggtcgcggctacgttcctgctgacactcgtaccagtgac
gaggatgaaactcgtgctatcggtcgcctgcaactggatgctacctacagcccggtacgt
cgcgtttcctacgtagtagaaagcgcgcgagtcgagcagcgtacagacctggacaagctg
gtaatcgacatcgagtccaacggaacaattgatccggaagagtgcattcgtcgtgctgct
acgattctgcagcagcagctggcggtattcgtggatctcgaagatgctgcggaccaggcc
aaggtcgagccggccgaaccggaaattgatccggttctgctgcgcccggtcgatgacctg
gagctgactgtacgttccgccaactgtctgaaagcagaacagatctactacatcggtgac
ctgattcagcgcaccgaagtggaactgctgaagactccgaacttgggcaagaagtcgctg
accgagatcaaggacgtgctggcatccaaaggtctgtctctgggtatgcgtcttgagaac
tggccacctgccagccttaagaacgacgataaggtcgcgtcctaa
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